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Domain assignment for ENSRNOP00000045040 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000045040
Domain Number 1 Region: 55-502
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2.15e-104
Family L-arabinose binding protein-like 0.0037
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000045040
Domain Number - Region: 685-814
Classification Level Classification E-value
Superfamily Calcium ATPase, transmembrane domain M 0.000314
Family Calcium ATPase, transmembrane domain M 0.054
Further Details:      
 
Domain Number - Region: 509-558
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00942
Family TNF receptor-like 0.046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000045040   Gene: ENSRNOG00000040335   Transcript: ENSRNOT00000043841
Sequence length 844
Comment pep:known chromosome:RGSC3.4:1:1009412:1021923:1 gene:ENSRNOG00000040335 transcript:ENSRNOT00000043841 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKKLCAFTIAFFPLKFCLILCSLTEPNCFWRIKKIEVYDGDLQNDCGFVLFTLESPIEEN
FYNHIINFRYFNVKKKYEFFLVMFFATDEINKNPYLLSNMSLIFSFIFGMCEDTMGVLDK
AYLHQNNYFDLLNYNCGRKKRCDVKLTGPSWKTSLKLSVNSRAPKIFFGPFNPNLSDHDQ
FPYIYQIATKDTYLLHGMVSLMFHFEWTWIGLVITDDDQGIQFHSDLREEMQRHAICLAF
VIMIPESIKLYNTKFKIYDQQLMTSSAKVTIIYGKMISTLGLSFRRWAYLVARRIWITTS
KLDVITYDKDFSLDFFHGTVIFVHHHNDIATFRNFMQTINTSKYPVDISQSMGQWNHFNC
SISKNKKKMDFFMLKNPLEWLTQHTFDMVLSEEGYNLYNAVYAVAHTYHELIFQQVESQE
MAKPKGLFTDCQKVASLLKTRVFTNPVGELVNMNHKENQCAKYDIFIIWNFPKGLGLKVK
IGSYFPCLQQSQHLHISEDWEWVTGETLVPSSVCSETCTAGFRKSHQKQTADCCFDCVQC
QENEIANDTADMEQCVRCPDDSYANLEQTECLQRVVTFLAYEDPLGMALGCMALSFSAIT
ILVLVTFVKYRDTPIVKANNRILSYILLISLVFCFLCSLLFIGHPNQATCILQQATFAIF
FTVAISTVLAKTITVVTAFKLTTPGRRIRKMMIKGATNLLIPICTLIQLVLCAIWLVTSP
PFIDRDIQSEHGKVIIICNKGSVTAFHFVLGYLSSLALGSFTVAFLARNLPDRFNEAKFL
TFSMLVFYSVWITFLPVYHSTRGKVMVIVEVFSILASSAGLLGCIFFQKCYVLLVRPDLN
VLQK
Download sequence
Identical sequences 10116.ENSRNOP00000045040 ENSRNOP00000045040

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