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Domain assignment for ENSRNOP00000045053 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000045053
Domain Number 1 Region: 56-501
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 3.36e-98
Family L-arabinose binding protein-like 0.0055
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000045053
Domain Number - Region: 510-556
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00847
Family TNF receptor-like 0.0081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000045053   Gene: ENSRNOG00000013563   Transcript: ENSRNOT00000052226
Sequence length 847
Comment pep:known chromosome:RGSC3.4:1:142267794:142290322:-1 gene:ENSRNOG00000013563 transcript:ENSRNOT00000052226 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MIDMFSLILVLLFLKASLLFCTLNDPKCFLRIKDKKNVDGDKEVDCFFSIYAKHGHVKND
FFSGNLDKQLTTKNIHLILSLYFSIEEINSTPQVLPNISLLVKIECNLLADRSKISLSSR
KGDYFPNFDCRNQRRYLIVFTGPMWFPTAMLGPLLYISRTPELYYGPFHPLLNTYEQFPY
LYQMAIKDTSIAIGMVTLVIYFSWNWVGLMISDDDLGLQFASELREEMQRYDICLAFVTV
ITYNSKLFLTMAGMYYNQIIMSLAKVVIIYGDIDSFLQVIFRLWQFVDIRRIWIATSQWD
IITSNGEFLFNSFHGTLSFSHHYSEISGFKEFIQTVYPLNYSNTISPAKLWWVNFNCFWP
SSNCKKLKKCSRKMLLKWLSNNQFEMAMSETNYNLYNAVYAVAHSLHELILQQANTLSNN
VEKELEFDSLQVLSSLKKIQFVNPAGDLVNLNQKENLNVDYDIFYTGDFLQSYGIKVKIG
NFFKYLTQPQKLLMFDEMVDWATDIRQTLPSICSTPCNPGFRKSPQEGKAVCCFDCNPCP
ENEISNMTDMDYCYKCLDNQYANSEGTHCLSKTVIFLSYEDPIGVTLACLALCFSALTAV
VFGIFLRNQDTLIVKANNRALSYCLLISLIYCFLCSLLFIGKPHMVTCIMQQTIFAVAFT
VAVSTVLSKTITVVLAFKFTLPSKKMRWLMTSGTSVLIIPICTMIQLIICGIWLGTYPPY
VDSDGHIEHGHILIVCNKGSVTAFYCVLGYLGSIALASFTVAFLARNLPDTFNEAKFLTF
SMLVFCSVWLTFLPVYHSTSGKALVIVEVFCILTSTAGLLICIFAPKCYIILLTPKNNSF
HTFRHKC
Download sequence
Identical sequences D4AB78
NP_001092982.1.100692 NP_001092982.1.4139 ENSRNOP00000045053 10116.ENSRNOP00000045053 ENSRNOP00000045053

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