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Domain assignment for ENSRNOP00000045537 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000045537
Domain Number 1 Region: 1-318
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 3.12e-71
Family L-arabinose binding protein-like 0.0053
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000045537
Domain Number - Region: 326-373
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00518
Family TNF receptor-like 0.0089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000045537   Gene: ENSRNOG00000030229   Transcript: ENSRNOT00000043129
Sequence length 667
Comment pep:known chromosome:RGSC3.4:1:141602289:141721711:-1 gene:ENSRNOG00000030229 transcript:ENSRNOT00000043129 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAPKDTSLALAMVSLFVHFSWNWVGAVVSDDDPGYEFILELRREMQRNNFCLAFVSIIVS
DDNLFLKRYNIYYNQIKMSSAKVVIIYGDKDSPLQVNFRLWNLFDIQRIWVTTSQWDMII
NNGKFLLNSFYGTLSFSHHYSELSGFKTFIQTAYPSNYSDDFSLGILWWVYFNCSLSLSE
CKNLQNCPKENIFRWLYRHHFEMSLSDTTYDLYNSMYAVAYTLQQMLLKQADTWQIDDGK
EPEFDSWQMLSFLRNIQFINPVGDKVNLNHEEKLDTKYEIHQTLTFLPNPVFKLKIGTFS
QNLSHGRQLYMLKEMIEWNTGHQQSPTSVCSIPCSPGFRKSPQLGKPVCCFDCTPCPENE
ISNMTNMNQCIKCLDDQYANPGGTHCLKKVIVFLGYEDPLGMSLAILALCFSALTAFVLS
IFLKHQETPTVKANNRTLSYVLLISLISCFLCSLLFIGHPSFTTCIMQQTTFAVVFTVAA
STVLAKTIIVILAFKVTNTSRKMRWLLVSGAPKFIIPICTMIQLILCGIWLGTSPPFVDA
DGHVEKGHILIFCNKGSILAFYCVLGYLVSIAIASFTLAFFARNLPDTFNEAKFLTFSML
VFCSVWVTFLPVYHSTKGKSMVAVEVFCILASSAGLLFCIFAPKCFIILLRPEKKSFQKF
QNIHSKI
Download sequence
Identical sequences ENSRNOP00000045537 10116.ENSRNOP00000045537

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