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Domain assignment for ENSRNOP00000046974 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000046974
Domain Number 1 Region: 65-497
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2.83e-109
Family L-arabinose binding protein-like 0.003
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000046974
Domain Number - Region: 503-554
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00127
Family TNF receptor-like 0.025
Further Details:      
 
Domain Number - Region: 579-692
Classification Level Classification E-value
Superfamily Clc chloride channel 0.0759
Family Clc chloride channel 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000046974   Gene: ENSRNOG00000030315   Transcript: ENSRNOT00000050676
Sequence length 830
Comment pep:known chromosome:RGSC3.4:14:489567:504155:-1 gene:ENSRNOG00000030315 transcript:ENSRNOT00000050676 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKKLCAFTAAFLFLKFSLILCNLTELNCFWRIKNSEDNYRDLRNDCGFVLLVFEEPIEKI
LNIFSFRIPARKYEFFLVMFFATDEINKNPYLLSNMTLIFSIIVGMCENTLGVLDIAYSQ
QNNSFDLINYSCGIQPYCDIDLTGPSWTTSLKLSIYSSTPKIFFGPFNPNLSDHDQFPYV
YQVATKDTYLFQGMVSLMLHFRWTWIGLVISDDDQGIQFLSDLKEKIHKHEICLAFVNMI
PENMQIYRTRAKIYDQQLMTSSAKVVIIYGEMNSTLEVSFRRWAYLGAQRIWITTSQWDV
ITKKDFSLDFFHGTVTFAHLHSDIAEFRNFMQTINTSKYPVDISQSMLGWNHFNCSILKN
NSKMDYFTFNNSLEWLAQHTFDMVLSEEGYNLYNAVYAVAHTYHELISQQVESQKITKPK
GVFTDCRQVASLLKTRVFTNPVGELVNMNQRENQCAEYDISIIWNFPQGLGLKVKIGKYF
PCLLQSQQLHISEELEWATGKTLVPSSMCSVTCTAGFRKIHQKQATDCCFDCVQCPENEV
SNDTADMEECMRCRDDTYANVEQTQCLQRAVSFLGYEDPLGMTLGCMALSFSAITVLVLV
TFVKYKDTPIVKANNRILSYILLISLVFCFLCPLLFIGHPNQATCILQQITFGVFFTVAV
STVLAKTITVLTAFKLTTPGRKIRKIMIKGAANLLIPICTVIQLVLCGIWLGTSPPFIDR
DMQSEHGKTIIICNKGSVIAFHFVLGYLGSLALGSFTVAFLARNLPDRFNEAKFLTFSML
VFYSVWITFLPVYHSTRGKVMVVVEVFSILASSAGLLGCIFVPKCYVLLI
Download sequence
Identical sequences ENSRNOP00000046974 10116.ENSRNOP00000046974

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