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Domain assignment for ENSRNOP00000048313 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000048313
Domain Number 1 Region: 2-435
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2e-98
Family L-arabinose binding protein-like 0.0013
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000048313
Domain Number - Region: 446-480
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0235
Family TNF receptor-like 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000048313   Gene: ENSRNOG00000025748   Transcript: ENSRNOT00000041490
Sequence length 751
Comment pep:known chromosome:RGSC3.4:12:19316533:19333500:1 gene:ENSRNOG00000025748 transcript:ENSRNOT00000041490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RITSQNYQFVMALIFAIDEINRNPILLPNMTLGFNIHSAGSIDSETVVSFLKWLTGQDRL
IPNYTCKTKEKSVAAITGTTWEISSLIGIFLGLYKYPQLSIGPFEPSMNNSEIFPFLYQM
AAKEPFLALGMVSLFVHFKWVGLVISEDENGVNFVTDLIPQMERNTVCVAFMEFIPVTHM
MNLENAFEYPIRIMRNPAKVVIIYANTDTSLGVLFRRWEYILPWRIWVTTSQWEVITSMR
HLILDSFHGTLIFSQCQGDISTFKEFVKTVRPSKYPDDIFLARLWEIYFDCAISNATCKS
LKNCSSRGNLGLLPWYHFDIAVNTGSYHVYNAVYAVAHTMHKMLIQEIDIQGVKNGGSMD
FPPLKVTDFFDSVDCHQYWPTRTLNKQHGELFRNYDILNFWDFPQGLTYKVKVGTFSPYF
PPGQQLSISEDRIEWSIGVEQQIPVSVCSESCSPGFRKSLYACCFDCVPCPENEISNVTG
KYWNAAIKNQINQKAVTFLAFENPLGMTLASMALCFSILTSFVLGIFVKYQNTPVVKANN
STLSYILLISLTFCFLCSFLFIGQPNTSTCILQQTTFGVVFTVAVSTVLAKTLQSSXPKF
IIPICTLIQTVLCGVWLGISPPFVDTDAHSEHGHIIIMCNKGSVTAFYCVLGYLGALSLV
SFTVAFMARNLPDAFNEAKFLTFSMLVFLSVWITFLPVYHSTKGKIMVAVEVFSILASST
GLLGCIFIPKCYIILARPDMNSLKCRRNRVQ
Download sequence
Identical sequences ENSRNOP00000048313 10116.ENSRNOP00000048313

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