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Domain assignment for ENSRNOP00000050611 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000050611
Domain Number 1 Region: 51-483
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2.24e-96
Family L-arabinose binding protein-like 0.0027
Further Details:      
 
Domain Number 2 Region: 603-804
Classification Level Classification E-value
Superfamily Calcium ATPase, transmembrane domain M 0.0000418
Family Calcium ATPase, transmembrane domain M 0.015
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000050611
Domain Number - Region: 507-555
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0188
Family TNF receptor-like 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000050611   Gene: ENSRNOG00000038497   Transcript: ENSRNOT00000040441
Sequence length 848
Comment pep:known chromosome:RGSC3.4:1:69973732:69994983:1 gene:ENSRNOG00000038497 transcript:ENSRNOT00000040441 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MFFLIVVFFLLYLPLLMANFIDPRCFWRINLNDIKEKDLDMSCAFVLGAVQLPMERDYFN
QTLNVLKTTKTNKYVLALAFSMDEINRNPDLLPNMSLVIKHTLSYCDGNTAPHIFKEKIF
RPLPNYICNEETMCSFLLIGLNWMSSISLFKDLDIFLFPRFLQISYGPFHSIFSDNEQFP
YLYQMTPKDTSLALAMVSFILYFNWNWVGLIISDNDEGNRFLSELKRETQNKEICFAFVN
MMANNEITFNHKNEMYYNQIVMSSTNVIIIYGETHSIIELIFRMWESPVIKRIWVTKSEL
DFPTSKRDSTNGTFYGTLAFLHHHGEISGFKNFVETRYHLRSRDLNLLIPEWKYFSYEAS
GSNCKILRNYSSNASLEWLTEQKFHMAFNDYSDSIYNAVYAMAHALHESHLQQVDKLEIR
NGKGASTHCLKLNSFLKKTHFTNPLGDKVIMKHRERVQEDYDIVHIQNFSRLRIKVKIGK
FSPYFRHRETFHLYGDMVELATGNRKMPSSVCSAACTPGFRKIWKEGMASCCFVCNPCPE
NEISNETNMEECVNCPEYQYANTEKNKCIQKRVIFLSYEDPLGMALALIAFCLSAFTAVV
LWVFVKHHVTPIVKANNRILSYILIISLMFCFLCSFFFIGHPNRSTCVLQQITFGIVFTV
AVSTVLVKTITVVLAFKVTDPGRRLRNFLISGAPNYIIPICTLFQCILCAIWLAVSPPFV
DIDEHSEHGHIIIICNKGSIVAFYCVLGYLACLALGSFTLAFLAKNLPDTFNESKFLTFS
MLVFCSVWVTFLPVYHSTKGRVMVAVEIFSILASSAGILGCIFAPKIYIILMKPDRNSIQ
KIMEKSNF
Download sequence
Identical sequences NP_001092966.1.100692 NP_001092966.1.4139 ENSRNOP00000050611 10116.ENSRNOP00000050611

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