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Domain assignment for ENSRNOP00000050842 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000050842
Domain Number 1 Region: 21-429
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2.09e-80
Family L-arabinose binding protein-like 0.0021
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000050842
Domain Number - Region: 454-501
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0353
Family TNF receptor-like 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000050842   Gene: ENSRNOG00000002717   Transcript: ENSRNOT00000041047
Sequence length 783
Comment pep:known chromosome:RGSC3.4:1:70296691:70297744:-1 gene:ENSRNOG00000002717 transcript:ENSRNOT00000041047 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
KLLKCLLFYRLSFHPTLRTTFTMEEINRNPDILPNMSLIIKHTLSYCDGKTALHIAKEKF
FRPLPNYVCSEESMCSFLLIGLNWMSSIILFRDLDTFFFPRISYGPFHSIFSDNEQFPYL
YQMTPKDTSLALAMVSFILYFNWNWIGLIISDNDEGNQFLSELKKEAQNKEICFAFVNMM
AIDDISFYDKTEMYYNQIVMSSTNVIIIYGETDSIIELSFRMWESPVIQRIWVTKSELDF
PTSKRDLNHGTFYGTLTFLHHHGEISEFKNFVEMWDHLRSRNLNLLISEWKYFSYETSGS
NCKILRNFTSNSSLEWLRNKKWERSRYSLLEGRFSLYCSIFSIPYRITSIICIAQKRCEP
LYGLMCLCVYDLKEWYLNSFLRKTHFTNPLGDRVIMKHRERVQEDYDIVHIHNFSQHLWI
KVKIGKFSPYFPNGRLFHLYGDMIELATGSKKMPSSVCSADCSPGFRKTWKEGMAACCFV
CSLCPENEISNETNMDQCVNCPEYQYANKEKSKCIQKGVIFLSYDDHLGMLLAIIAFCLS
AFTAAILWVFVMHHNTPIVKANNRILSYILIMSLMFCFLCSFFFIGHPNRATCILQQITF
GIVFTVSVSTVLAKTITVVLAFKITDPGRRLRNFLVLGLPNYIIPICSLLQCILCTIWLA
VSPPFVDIDQHSEHGNIIIVCNKGSVMAFYCVLGYLACLAFGSFTMAFLAKNLPDTFNEA
KFLTFSMLVFCSVWVTFLPVYHSTKGRVMVAVEVFSILASSAGMLGCIFAPKLYIILMRP
DRN
Download sequence
Identical sequences ENSRNOP00000050842 10116.ENSRNOP00000045164

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