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Domain assignment for ENSRNOP00000050892 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000050892
Domain Number 1 Region: 55-502
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 3.7e-102
Family L-arabinose binding protein-like 0.004
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000050892
Domain Number - Region: 509-558
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00589
Family TNF receptor-like 0.044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000050892   Gene: ENSRNOG00000032583   Transcript: ENSRNOT00000046586
Sequence length 844
Comment pep:known chromosome:RGSC3.4:1:245888:356821:-1 gene:ENSRNOG00000032583 transcript:ENSRNOT00000046586 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKKLCAFTIAFFPLKFCLILCSLTEPNCFWRIKKIEVYDGDLQNDCGFVLFTLESPIEEN
FYNHIINFRYMNVKQKYEFFLVLLFATDEINKNPYLLSNMSLIFSFIFGMCEDTMGVLDK
AYLHQNNYFDLLNYNCGRKKRCDVKLTGPSWKTSLKLSVNSRAPKIFFGPFNPNLSDHDQ
FPYIYQIATKDTYLLHGMVSLMFHFEWTWIGLIITDDDQGIQFHSDLREEMQRHAICLAF
VIMIPESIKLYNTKFKIYDQQLMTSSAKVTIIYGKMISTLELNFARWTYLVARRIWITTS
KLDVITYDKDFSLDFFHGTVIFAHHHNDIATFRNFMQIINTSKYPVDISQSMGQWNHFNC
SISKNKKKMDFFMLKNPMEWLTQHTFDMVLSEEGYNLYNAVYAVAHTYHELIFQQVESQE
MAKPKGLFTDCQQVASLLKTRVFTNPVGELVNMNHKENQCAKYDIFIIWNFPNGLGLKVK
IGSYFPCLQQSQHLHISEDWEWVTGETLVPSSVCSETCTAGFRKSHQKQTANCCFDCVQC
QENEIANDTADMEQCVRCPDDSYANLEQTQCLQRAVTFLAYEDPLGMALGCMALSFSAIT
VLVLVTFVKYRDTPIVKANNRILSYILLISLVFCFLCSLLFIGHPNQATCILQQATFAIF
FTVAISTVLAKTITVVTAFKLTTPGRRIRKMMIKGATHLLIPICTLIQLVLCAIWLVTSP
PFIDRDIQSEHGKVIIICNKGSVIAFHFVLGYLGSLALGSFTVAFLARNLPDRFNEAKFL
TFSMLVFYSVWITFLPVYHSTRGKVMVIVEVFSILASSAGLLGCIFVQKCYVLLVRPDLN
VLQK
Download sequence
Identical sequences ENSRNOP00000050892 NP_001092931.1.100692 NP_001092931.1.4139 10116.ENSRNOP00000045701

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