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Domain assignment for ENSRNOP00000051358 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000051358
Domain Number 1 Region: 52-483
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.02e-93
Family L-arabinose binding protein-like 0.0029
Further Details:      
 
Domain Number 2 Region: 553-759
Classification Level Classification E-value
Superfamily Calcium ATPase, transmembrane domain M 0.00000929
Family Calcium ATPase, transmembrane domain M 0.032
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000051358
Domain Number - Region: 510-545
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00863
Family TNF receptor-like 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000051358   Gene: ENSRNOG00000031562   Transcript: ENSRNOT00000047147
Sequence length 797
Comment pep:known chromosome:RGSC3.4:1:70654662:70680504:1 gene:ENSRNOG00000031562 transcript:ENSRNOT00000047147 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MFILMIVFFLLNIPLLMANSVDPRCFWKINLNEVKDIDLDTSCYFILEAVQLPMEKDYFN
QTLNVLKNTKYHRYALALAFTLDEINRNPHILPNMSLIIKHTLGHCDGNIPLRLLNQIFY
MPFPNYGCNEETMCSFMLMGPNLWPSVDFFIHLNILFPHFLQISFGPFHSIFSDNEQFPY
IYQMTPKDTSLALAMVSFILYFNWNWVGLVISDNDEGNQFLTELKKETHNTEICFAFVNM
MAINENSFHEKTDMYYNQIVMSTANVIIIYGERPSIIELCFRTWTSPVIQRIWVTKSELY
FPTSKRDLSHGTFYGTLAFQQHHDVISGFKNFVQTWYHLKSMDLYLLKPEWGFFEYETSA
SYCKILMSNSSNVSLEWLMEQKFDIAFNDNSHSIYNAVYAMAHALHEKNLKQIDNQEISY
GKGASTHCLKLHSFLRTIHFTNPFGERVIMKERVRVQEDYDIVHLQNCSQHLRIKVKIGQ
FSPYFPHGGQFHLYEDMIDLATGSRKMPLSMCSADCRPGYRKFWKEGMAACCFVCSPCPD
NEISNETTVVLWVFVKHHDTPIVKANNRILSYILIMSLMFCFLCSFFFIGHPNRGTCILQ
QITFGIVFTVAVSTVLAKTITVLLAFQVTDTGRKLRNFLVSGTPNYIIPICSLLQCTLCA
IWLAVSPPFVDIDEHSEHGHIIIVCNKGSVMAFYCVLGYLAFLALGSFTMAFLAKNLPDT
FNEAKFLTFSMLVFCSVWITFLPVYHSTKGRVMVAVEIFSILTSSAGMLGCVFAPKIYII
LMKPERILSKRQEKSRF
Download sequence
Identical sequences ENSRNOP00000051358 10116.ENSRNOP00000051358

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