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Domain assignment for ENSRNOP00000051379 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000051379
Domain Number 1 Region: 65-504
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 4.32e-94
Family L-arabinose binding protein-like 0.00087
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000051379
Domain Number - Region: 512-559
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0108
Family TNF receptor-like 0.0086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000051379   Gene: ENSRNOG00000043159   Transcript: ENSRNOT00000045611
Sequence length 853
Comment pep:known chromosome:RGSC3.4:1:142010227:142055405:-1 gene:ENSRNOG00000043159 transcript:ENSRNOT00000045611 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MIKMFTFLFAFLVLKLSFLLCSSIDNRCFWRLKTKTPWEEDKDIDCFFFIYTKFGHVKNE
QFSGNLDKRLTTKNIHLILTLYFALEEINMNPNILPNISLLVKIECSLLDDWRINSLSSK
REEYLPNYYCINQRSYLIVLTGPMCETNTLYSRFFMLFLTFYGLQLYYGPFHPLLSSQEL
YPYLYQMAPKDTSLALAMVSLLVHFSWNWVGAVVSDDDPGYEFILELRREMQRNSVCLAF
VSIIISDEKLFLKSINIYYKQITMSSAKVVIIYGDKDSPLQLNFRLWNLLDIQRIWVTTS
QWDMIIKNGKSLLTSFYGTLTFSHHYSELSGFKTFIQTAFPSNYSDDISLARLWWMYFNC
SLSLSDCNNLQNCSNENIVRWLFRHHFEMSLSDTTYDLYNSVYAVAHTLQQMLVQQEDTW
HIDDGKELEFDSWQMVSFLKNTQFINPAGDKVNLNHKEKPDTEYDIHYTMDFWPNLVFKL
KMETFSQNLQHGQQLNMLKEMIEWITGHQQSPTSICSIPCSPGFRKSPQQGKPVCCFDCT
PCPEDEISNMTNMNQCIKCLDDEYANPGGTNCFKKLIAFLGYEDPLGMSLTILALCFSAL
TAFVFGIFLKHQESPTVKANNRTLSYVLLTSLISCFLCSLLFIGHPNFATCIMQQTTFAV
VFTVAASTVLAKTIIVILAFKVTNTSRKMRWLLVSGAPKFIIPICTMIQLILCGIWLGTS
PPFVDADGHVEKGHILIFCNKGSVLAFYCILGYLGSIAIGSFTLAFLARNLPNTFNEAKY
LTFSMLVFCSVWITFLPVYHSTKGKSMVAVEVFCILASSAGLLFCIFAPKCFIILLRPEK
KSSQKFQNIHSKM
Download sequence
Identical sequences D3ZYH2
NP_001092981.1.100692 NP_001092981.1.4139 10116.ENSRNOP00000051379 ENSRNOP00000051379 ENSRNOP00000051379

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