SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSRNOP00000052623 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSRNOP00000052623
Domain Number 1 Region: 185-452
Classification Level Classification E-value
Superfamily Caspase-like 1.5e-89
Family Caspase catalytic domain 0.000000000845
Further Details:      
 
Domain Number 2 Region: 1-108
Classification Level Classification E-value
Superfamily DEATH domain 7.85e-28
Family Caspase recruitment domain, CARD 0.0000273
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000052623   Gene: ENSRNOG00000012944   Transcript: ENSRNOT00000055767
Sequence length 454
Comment pep:known chromosome:RGSC3.4:5:160704225:160721091:1 gene:ENSRNOG00000012944 transcript:ENSRNOT00000055767 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEEADRQLLRRCRVRLVRELQVAELWDALLSRELFTRDMIEDIQRAGSGSRRDQARQLVI
DLETRGRQALPRFISCLEDTGQGSLASFLQSSGQAAKQDPEAVTPLDHLVPVVLGPMGLK
SKEQKVVKLDPSQPALGNLTPVVLGPEELWPTRLRPEVLTPETPRPVDIGSGRAHDVCTP
GKIERHADMAYTLDSDPCGHCLIINNVNFCPSSGLSTRIGSHVDCEKLQHRFCWLRFMVE
VKNDLTAKKMVTALMEMAHRDHRALDCFVVVILSHGCQASHLQFPGAVYGTDGCSVSIER
IVNIFNGTGCPSLGGKPKLFFIQACGGEQKDHGFEVAFTSSQDKAFDSDSEPDAVPYQEG
PRTLDQLDAVSSLPTPSDILVSYSTFPGFVSWRDKKSGSWYIETLDGVLEQWARSEDLQS
LLLRVANAVSEKGVYKQIPGCFNFLRKKLFFKLH
Download sequence
Identical sequences ENSRNOP00000052623 10116.ENSRNOP00000017972

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]