SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSRNOP00000054476 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSRNOP00000054476
Domain Number 1 Region: 815-892
Classification Level Classification E-value
Superfamily SH3-domain 8.93e-19
Family SH3-domain 0.0000904
Further Details:      
 
Domain Number 2 Region: 1416-1491
Classification Level Classification E-value
Superfamily SH3-domain 0.00000000000144
Family SH3-domain 0.002
Further Details:      
 
Domain Number 3 Region: 982-1119
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000209
Family Fibronectin type III 0.001
Further Details:      
 
Domain Number 4 Region: 1525-1600
Classification Level Classification E-value
Superfamily SH3-domain 0.0000000000236
Family SH3-domain 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000054476   Gene: ENSRNOG00000030452   Transcript: ENSRNOT00000051991
Sequence length 1606
Comment pep:known chromosome:RGSC3.4:11:85787267:85792105:-1 gene:ENSRNOG00000030452 transcript:ENSRNOT00000051991 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTKDSPTPLGGGRASPKKPGSPGPAAAVLEEQRRELEKLRAELEGERARGRSERRRFATQ
TRQLREAAEQERQQLADHLRSKWEARRLRELRQLQEEVQREREAEIRQLLRWKEAELRQL
QQLLHQERDVVLRQARELQRQLAQELVNRGYCSRSGASEASAAQCRCRLQEVLALLRWET
DGEQAARIRHLQAALDVERQLFLKYILEHFRWQPALPGPADPQTTHSLEEPPLEAQSNTD
GTPKPARRLGSLESLNTGVRVHSPNDLLPTRASSLESLATAHSCSLDNTLNCPETSESEV
RAPSTTASIPDTSSPQPPPQLPSKHRKPNDLQKESSENKPCEDSTSSSPGLDYHELVRQN
SELAEALQVLVRRCCDLREENLQLRRTGFSEEAGEKVKWLKVKHAELTDLAQRLEDRARK
LQETNLRAMSAPMPGESLEGLDLGQVFTCQRAQDLSEQAGALQAKDLQIEALRRECHLLQ
ARIAADLGSSSHPEEGATCAQWCNISDLDRLQRESQREVLRLQRQLTLHQSKAGAWADTG
SPSAPSEIARHQVQALERELGLQRRECEELSVQAAAAERRYEETEAQLQAALHKGARLSE
ENARLQALANWMKKMADENSNVSRQQSHARQRQELEATGLLAEQLLQQEGYAQDRRQQLQ
QYQNKTPSDLRISGKEMQGLQFQPGHPSESSETTQASESQVRDSRRLKFKTKSEEYILPL
PTRDIQPPACLSQQENPVALGEPAAASQVSDRNPSSQSLDSKLQAKKTSSQSNSSSEVES
MWATVPSCLSLDMDTASEVDDLEPDSMSTPLEMRSLEAPIVPKLKIFLARYSHNPFEGPS
ERSHDELPLTAGDYVYVFGDVDEDGFYEGELVNGQRGLVPSNLVEPISGSPILSHLFLKS
PGAGPTSLPAEHSKALKKGSLLLGEVQERGLCQAGRVDSKTDVASESLKTKTEACWLGLK
SSMEEQSFSRPLLEAKGALCLAPMELQLQNVTATSATITWASGSNRYPHVVYLDDEEHIL
TPSGVNHYTFQGLHPGTRYQVRVGVQLPRDLLQVLWETMSSTVTFDTPLAGPPDPPLDVL
VEHHAASPGVLVVSWLPVTIDSAGSSNGVQVTGYAVYVDGFKVTEVANATAGNTLLELSQ
LQLPLGCQKVSVRTMSLYGESLDSVPAQIPEDCFSCYPFLEAPPFNYTDGDPFPVCHQKL
AQASLSAKSSPHVPGSCGEPQAKFLEAFSEEQPRKHLSLSSLSSDGANKQVQGPTEAWKG
YEKDLSFQRSPQNHKPPLLFGQSGVEEGHAPHICISGSPSPGFIHLSSEVGPGKILCWEE
PGLEKALLQNQYAQMVPHHQQGSSQCHTADFHHIFEEKEALCLDSRCTEKPEQRKKSQNG
QRQGTPGSKRECSVLCPAPTSKIIKIASGGSDQLETDGNSPVRVFLALFDHSPLARSVNS
EATEEELSFQKGQLLRVWGSRDHHGFYHGECNGQVGKIPGHLVVEVEVGTQQTDGRWLLP
PQGHLHSEAQREDLEGLTNSQGSYMLQGNSRTPTLWTPKTMVAALDYDPRDGRAGVRAKG
KLVLRAGDVVTVYGPVDDKGFYYGEYGGHRGLVPAHLLDDLPVHGE
Download sequence
Identical sequences ENSRNOP00000054476 10116.ENSRNOP00000054476 ENSRNOP00000054476

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]