SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSRNOP00000059423 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSRNOP00000059423
Domain Number 1 Region: 572-735
Classification Level Classification E-value
Superfamily Sec7 domain 3.53e-56
Family Sec7 domain 0.0000431
Further Details:      
 
Domain Number 2 Region: 777-912
Classification Level Classification E-value
Superfamily PH domain-like 2.12e-28
Family Pleckstrin-homology domain (PH domain) 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000059423   Gene: ENSRNOG00000013884   Transcript: ENSRNOT00000068629
Sequence length 1039
Comment pep:known chromosome:RGSC3.4:16:23326755:23662116:1 gene:ENSRNOG00000013884 transcript:ENSRNOT00000068629 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MELRGKGAEPFVWVNNASAHSQSVAKAKYEFLFGKSEEKTPDASDHGGSTLLPPTVTNEF
PEYGTMEEGAEGLRASLDFDAKSPPCHLPGQQAVHLLAGQDSVLNSVTEGPNGAPQCHPQ
EQSLQPIDSLISALKATEARIASGTFQATKVLDKDANFSVHRVDKEPRTASHKPQRAHRT
FPVGPGKSPDRPLSVEVPTEEKFSLHIQEDLTALLPEETPAQLSQITNYRRQGPLHVPES
ACPVSLGSAKNHNSVDRIGALKDQKSDLGRENPRGCDRGGSMGRQTRIKHVEFQGVEILW
TGEEVESRHPPPERTASPVRKEFAKGPSHSSSATGACSSSTHLTGSVSDETCKEPSARPG
TSLGTLSPVPLGESGEDDVFLRESKEHLEENFDIQGDKERFFKQEEHLRGGDDDILGPGY
TEDSTDVYSSQFETILDNTSLYYSAESLETLYSEPDSYFSFEMPLTPMIQQRIKEGGQFL
ERTSVGGHHDVLSVSADGGIVMGYSTGITNGLHDPSNSVYTRGPQEIAFWGSSGYCFDKG
KPTRLDGNSEMGSTEILEKETTENLSNGTNSNVEAAKRLAKRLYHLDRFKRSDVAKHLGK
NNEFSKLVAEEYLKFFDFTGMTLDQSLRYFLKAFSLVGETQERERILIHFSNRYFSCNPD
TITSKDGVHCLTCALMLLNTDLHGHVNIGKKMTCQEFITNLQGVNEGGDFSKDLLKALYN
SIKNEKLEWAADDEEKKKSPSEGTDEKANGTHPKTISRIGSTTNPFLDIPHDPNAAVYKS
GFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKSLSDEDLKNAVSVH
HALASKATEYEKKPNVFKLKTADWRVLLFQTQSPEEMQGWINKINCVAAVFSAPPFPAAI
GSQKKFSRPLLPATTTKLSQEEQLKSHESKLKQITTELAEHRSYPPDKKVKAKDVDEYKL
KDHYLDFEKTRYEIYVSILKEGGKDLLSTEGNEPVGLKKSHSSPSLNPDASPVTAKVKRN
VSERKDHRPETPGIKQKVT
Download sequence
Identical sequences ENSRNOP00000059423 10116.ENSRNOP00000060259

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]