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Domain assignment for ENSRNOP00000062604 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000062604
Domain Number 1 Region: 323-404
Classification Level Classification E-value
Superfamily DEATH domain 8.75e-20
Family DEATH domain, DD 0.00082
Further Details:      
 
Domain Number 2 Region: 37-90
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00000000273
Family TNF receptor-like 0.0022
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000062604
Domain Number - Region: 99-150
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00153
Family TNF receptor-like 0.0046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000062604   Gene: ENSRNOG00000021814   Transcript: ENSRNOT00000065749
Sequence length 407
Comment pep:known chromosome:RGSC3.4:5:169345282:169348961:1 gene:ENSRNOG00000021814 transcript:ENSRNOT00000065749 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEQRPRGCVVEPLFLPSLLLLLLLLLGGHGQGGTPGRCDCASEPQKRYGQLCCRGCPKGQ
YMKAPCTEPCGDSSCLPCPPGTFLARDSHFKTDCTRCQVCDEEALQVTLENCSAETDTHC
GCQSGWCVDCSTEPCGKSSPFSCTPCSSYEPTTYRPCPPGFYIHGNGCASCPTSFSSVCP
KACTAVCGWKQMFWVQVLLGASFLLGTVLICAYCRWQPCKPVVTADIAGMETLASPQTTH
FSASDSAHTLLPPPGSTGKVCTTVQLVGNNWTPGLSQTEEVVCRQASQPWDQLPNRTLGP
PLVPPLSPAPPAGSPAAVLQPGPQLYDVMDAVPARRWKEFVRTLGLREAEIEAVEVEICR
FRDQQYEMLKRWRQQQPAGLGAIYAALERMGLEGCAEDLRSRLQRGP
Download sequence
Identical sequences D4ADP7
ENSRNOP00000062604 ENSRNOP00000052331 NP_001131116.1.100692 NP_001131116.1.4139 10116.ENSRNOP00000052331

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