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Domain assignment for ENSRNOP00000063251 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  ENSRNOP00000063251
Domain Number - Region: 42-91
Classification Level Classification E-value
Superfamily TNF receptor-like 0.000549
Family TNF receptor-like 0.01
Further Details:      
 
Domain Number - Region: 108-139
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00908
Family TNF receptor-like 0.0066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000063251   Gene: ENSRNOG00000014265   Transcript: ENSRNOT00000065261
Sequence length 415
Comment pep:known chromosome:RGSC3.4:15:40054756:40117968:-1 gene:ENSRNOG00000014265 transcript:ENSRNOT00000065261 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAFKVLPEDRTVLFAAILLVGHLSCKASCETGDCRQQEKDRSGNCVLCKQCGPGMELSKE
CGFGYGEDAQCVPCRPHRFKEDRGFQKCKPCVDCALVNRFQRANCSHTSDAVCGDCLPGF
YRKTKLVGFQDMECVPCGDPPPPYEPHCTSKVNLVKISSTVSSPRDTALAAVICSALATV
LLALLILCVIYCKRQFMEKKPSWSLRSQDIQYNGSELSCFDQPQLRHCAHRACCQYHRDS
VQTYGPVHLIPPLCCEEARSSARAALGCGLHSTATLQERNTASVGDAMPVFFGSVSRSIC
AEFSDAWPLMQNPLGGDSSLCDSYPELTGEDINSLNPENESSTSVDSNGGQDLAGAAAPD
SSGDFSENTDSPRYGDADTVWEQTLAQDAQRTPSREGWEASENLNLATSTAFQDA
Download sequence
Identical sequences 10116.ENSRNOP00000019268 ENSRNOP00000063251

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