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Domain assignment for ENSRNOP00000005477 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000005477
Domain Number 1 Region: 370-537,593-746
Classification Level Classification E-value
Superfamily L domain-like 4.13e-47
Family Ngr ectodomain-like 0.00018
Further Details:      
 
Domain Number 2 Region: 151-357
Classification Level Classification E-value
Superfamily L domain-like 1.56e-41
Family Ngr ectodomain-like 0.00025
Further Details:      
 
Domain Number 3 Region: 1015-1204
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.38e-41
Family Laminin G-like module 0.0015
Further Details:      
 
Domain Number 4 Region: 12-120
Classification Level Classification E-value
Superfamily L domain-like 8.84e-27
Family Ngr ectodomain-like 0.0032
Further Details:      
 
Domain Number 5 Region: 866-907
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000678
Family EGF-type module 0.0086
Further Details:      
 
Domain Number 6 Region: 787-827
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000574
Family EGF-type module 0.0046
Further Details:      
 
Domain Number 7 Region: 943-984
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000072
Family EGF-type module 0.0076
Further Details:      
 
Domain Number 8 Region: 908-946
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000545
Family EGF-type module 0.0081
Further Details:      
 
Domain Number 9 Region: 829-873
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000671
Family EGF-type module 0.01
Further Details:      
 
Domain Number 10 Region: 1200-1241
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000127
Family EGF-type module 0.012
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000005477
Domain Number - Region: 1291-1319
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000241
Family EGF-type module 0.016
Further Details:      
 
Domain Number - Region: 1243-1280
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000624
Family EGF-type module 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000005477   Gene: ENSRNOG00000003840   Transcript: ENSRNOT00000005477
Sequence length 1400
Comment pep:known chromosome:RGSC3.4:14:67548166:67697073:-1 gene:ENSRNOG00000003840 transcript:ENSRNOT00000005477 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
IFLGVCLYYMCDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLT
LNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSH
LRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPIACTCSNNIVDCRGKGLTEIPTNLPET
ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT
ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRA
IQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGT
EDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRLNNNEFTVLE
ATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLK
TLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLANPFNCN
CHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCPS
ECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRI
STLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFGDLS
ALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG
PVDVTIQAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDVPIHACISNPCKHG
GTCHLKEGENDGFWCTCADGFEGESCDINIDDCEDNDCENNSTCVDGINNYTCLCPPEYT
GELCEEKLDFCAQDLNPCQHDSKCILTPKGFKCDCTPGYIGEHCDIDFDDCQDNKCKNGA
HCTDAVNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIIRVNEPICQCLP
GYLGEKCEKLVSVNFVNKESYLQIPSAKVRPQTNITLQIATDEDSGILLYKGDKDHIAVE
LYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLTLDSSLSLSVDGGSPKIITNLSK
QSTLNFDSPLYVGGMPGKNNVASLRQAPGQNGTSFHGCIRNLYINSELQDFRKVPMQTGI
LPGCEPCHKKVCAHGTCQPSSQSGFTCECEEGWMGPLCDQRTNDPCLGNKCVHGTCLPIN
AFSYSCKCLEGHGGVLCDEEEDLFNPCQVIKCKHGKCRLSGLGQPYCECSSGFTGDSCDR
EISCRGERIRDYYQKQQGYAACQTTKKVSRLECRGGCAGGQCCGPLRSKRRKYSFECTDG
SSFVDEVEKVVKCGCTRCAS
Download sequence
Identical sequences 10116.ENSRNOP00000005477 ENSRNOP00000005477

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