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Domain assignment for ENSRNOP00000028697 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000028697
Domain Number 1 Region: 129-155,183-420
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 9.44e-69
Family Nuclear receptor ligand-binding domain 0.00000000199
Further Details:      
 
Domain Number 2 Region: 76-161
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 3.16e-30
Family Nuclear receptor 0.00000936
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000028697   Gene: ENSRNOG00000021139   Transcript: ENSRNOT00000028697
Sequence length 422
Comment pep:known chromosome:RGSC3.4:1:209587682:209597677:-1 gene:ENSRNOG00000021139 transcript:ENSRNOT00000028697 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVTLASGPAPARCLPGHKEEEDGEGAG
SGEQGSGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNE
CEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGP
LAVAGGPRKTAPVNALVSHLLVVEPEKLYAMPDPASPDGHLPAVATLCDLFDREIVVTIS
WAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAG
LGDLGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLE
YEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEMLEAM
MD
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Identical sequences O08580 Q5QJV7
ENSRNOP00000028697 ENSMUSP00000025906 ENSMUSP00000025906 ENSRNOP00000028697 10116.ENSRNOP00000028697 NP_001008511.2.100692 NP_001008511.2.4139 NP_031979.2.92730 ENSMUSP00000025906

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