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Domain assignment for ENSRNOP00000049930 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000049930
Domain Number 1 Region: 52-504
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2.9e-105
Family L-arabinose binding protein-like 0.0038
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000049930
Domain Number - Region: 506-559
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0148
Family TNF receptor-like 0.0098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000049930   Gene: ENSRNOG00000029458   Transcript: ENSRNOT00000042466
Sequence length 857
Comment pep:known chromosome:RGSC3.4:1:61256027:61271847:-1 gene:ENSRNOG00000029458 transcript:ENSRNOT00000042466 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MFTLSLFFLLLNIPLLMTCLIYPRCFWSMRQDEYENRSLERGCAFFIRAVKWPVEKEYFS
NALNIQTHTENQKYALALAFSMNEINLNPNLLPNMSLVFTYSTDACDWEAIFKSVIHLDL
QEHKILPNYICTEDIKCGVALTGFNWATTVTIHILLNNFIFQKFIHLTYGSFYPVLSDHE
KFPYLYQMASEDTSLALALVSFIIHFSWNWVGLAISDNDKGTQFLSYLRREMEKNTVCFA
FVNMIPVNMRLFMSRAEVYYNQIMTSSTNVVIMYGDKDSTLAVSFRMWVSLGIQRIWITT
AQWDVTPRMKDLTFDNLCGTFAFGQHHGEIYGLKNYAQTLNPFIYSDEYLLKLEWMYFNC
NVTASKWKPFKNCSSNHSLEWLMTHTFDMAFIEGSYDIYNAVYAFAHALHQVTFQKGDNL
PTDNRKEQDYDCKKLCSFLRKTHFTNPAGDRVNMNQIEKLQEEYDIFYIWNFPQGIGLKL
KIGIFSPYFQTGQHLHLSEDIIEWAKEGSQMLTSVCSADCGPGFRKFRKNGMPACCFDCS
PCPENKISNETNVEMCILCPEDQYANTEQNHCIQKPLIFLTYEEPLGITISLMALCFSAL
TAVILGVFVKHHSTPIVKASNHILTYILLISLIFCFLCPLLFIGHPNSATCILQQITFGV
VFTVAISTVLAKTITVILAFKVTAPQRMMKYFLVQRASNYIIPMCTLIQVIVCAVWLGAS
PPFVDIDTQSEHGHIIIVCNKGSVTAFYCVLGYLACLSFASFFLAFFSRNLPGNFNEAKS
MTFSMLLFCSVWITFLPVYHGTKGKVMVAVEIFSTLASSAGMLGCIFIPKCYTILFRPDK
NSLQMIREKLSSHTHIS
Download sequence
Identical sequences D3ZPC9
ENSRNOP00000049930 10116.ENSRNOP00000049930 NP_001092960.1.100692 NP_001092960.1.4139 ENSRNOP00000049930

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