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Domain assignment for ENSRNOP00000052999 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000052999
Domain Number 1 Region: 296-480
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.7e-37
Family Pentraxin (pentaxin) 0.00089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000052999   Gene: ENSRNOG00000016156   Transcript: ENSRNOT00000056152
Sequence length 494
Comment pep:known chromosome:RGSC3.4:7:118026909:118070004:-1 gene:ENSRNOG00000016156 transcript:ENSRNOT00000056152 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LKFLAVLLAAGMLAFLGAVICIIASVPLAASPARALPGGTDNASAASAAGAPGPQRSLSA
LQGAGGSAGPSVLPGEPAASVFPPPPGPLLSRFLCTPLAAACPSGAEQGDAAGERAELLL
LQSTAEQLRQTALQQEARIRADRDTIRELTGKLGRCESGLPRGLQDAGPRRDTMADGAWD
SPALLVELENAVRALRDRIERIEQELPARGNLSSSAPAPAVPTALHSKMDELEGQLLAKV
LALEKERAALSHGSHQQRQEVEKELDALQGRVAELEHGSSAYSPPDAFKVSIPIRNNYMY
ARVRKAVPELYAFTACMWLRSRSGGSGQGTPFSYSVPGQANEIVLLEAGLEPMELLINDK
VAQLPLSLKDSNWHHICIAWTTRDGLWSAYQDGELRGSGDNLAAWHPIKPHGILILGQEQ
DTLGGRFDATQAFVGDIAQFNLWDHALTPAQVLGIANCTGPLMGNVLPWEDKLVEAFGGA
KKAAFDVCKGRAKA
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Identical sequences F1LSY2
ENSRNOP00000052999 10116.ENSRNOP00000004703 ENSRNOP00000004703

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