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Domain assignment for ENSRNOP00000055284 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000055284
Domain Number 1 Region: 103-224
Classification Level Classification E-value
Superfamily PX domain 0.0000000000000144
Family PX domain 0.0043
Further Details:      
 
Domain Number 2 Region: 304-358
Classification Level Classification E-value
Superfamily SAM/Pointed domain 0.0000000236
Family SAM (sterile alpha motif) domain 0.0052
Further Details:      
 
Domain Number 3 Region: 896-926
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000488
Family Retrovirus zinc finger-like domains 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000055284   Gene: ENSRNOG00000018226   Transcript: ENSRNOT00000058486
Sequence length 950
Comment pep:known chromosome:RGSC3.4:19:51858778:51899252:-1 gene:ENSRNOG00000018226 transcript:ENSRNOT00000058486 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MASNHPAFSFHQKQVLRQELTQIQSSLNGGGGGGGGGGGGGKSAPGPSGALPTCSACHKM
APRTETPVSSISNSLENALHTSAHSTEEALPKRPLGKHGKVSVEKIDLKGLSHTKSDRGV
ECSFEVLWSDSSVTSVTKSSSEVTEFISKLSQLCPEENLDKLIPCLAGPDSFYVERNHVD
LEAGLRFLASIPAHTLKHDHVRKFFSASSPSQQLQSPSPGNPSPPKVGAMMGVSGRPVCG
VAGIPSSQSSTQHHLQHSASSSASLPHCSHTGGAGPALAYRTQVDNSPTILMPSGLQAPQ
PQEQNGILDWLRKLRLHKYYPVFKQLTMEKFLSLTEEDLNKFESLTMGAKKKLKTQLELE
KEKSERRCLNSSAPSLVTSSGVARVTPTSHVGPVQPGRSSHASELRVEVEPPAHQLPREG
SSSEYSSSSSSPMGVQAREESSDSAEESDRRVDIHVEGTEKEKPVMLLAHFPSSSARPTA
QVLPVQNETGSSPAGHHPLPAQLMPAAPHLAPVRMLNSVHKSDRGSTDVKLLSSSVHSLL
SLEERGKGPAPRSGTKVDKSFGGAVLDTLPSAAPHPPVQGLSGLVENTSVSPNVSFGPRA
KVVHAATLDRVLKTAQQPALTVETSSAATGTPSTVLHVARPPIKLLLSSSVPADTAISGQ
TSCPNNGQISVPPAILNPRNALYTANTKVAFSAVSSVPVGPLQGSFCANSNTASPSSHPS
TSFASMATLPSCPAPSSSPALSSVPESSFYSGGAGSSSPGNIPASSQSHHHHHHHQQPPA
PPPPGCIVCTSCGCSGSCGSNGLTVSYANYFQHPFSGPSMFTFPFLPFSPMCGNGYVSTQ
QYGGGSAFPVVHTAYNGSVTPDPVLGGQSTFAVPPMQHFMTGTAGVHQAQGLVGSSNGSS
HKKSGNLSCYNCGATGHRAQDCKQPSMDFNRQGTFRLKYAPPAESLDSTD
Download sequence
Identical sequences XP_001079169.3.4139 ENSRNOP00000064290 ENSRNOP00000055284 10116.ENSRNOP00000055284

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