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  Home > Genomes > Rattus norvegicus 69_3.4 > ENSRNOP00000060444

Domain assignment for ENSRNOP00000060444 from Rattus norvegicus 69_3.4

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000060444
Domain Number 1 Region: 1243-1450
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 6.05e-45
Family Laminin G-like module 0.00025
Further Details:      
 
Domain Number 2 Region: 1732-1958
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.94e-35
Family Laminin G-like module 0.000000999
Further Details:      
 
Domain Number 3 Region: 1501-1708
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.42e-31
Family Laminin G-like module 0.00061
Further Details:      
 
Domain Number 4 Region: 363-430
Classification Level Classification E-value
Superfamily Kazal-type serine protease inhibitors 1.52e-16
Family Ovomucoid domain III-like 0.0067
Further Details:      
 
Domain Number 5 Region: 67-137
Classification Level Classification E-value
Superfamily Kazal-type serine protease inhibitors 0.0000000000000735
Family Ovomucoid domain III-like 0.0054
Further Details:      
 
Domain Number 6 Region: 446-495
Classification Level Classification E-value
Superfamily Kazal-type serine protease inhibitors 0.000000000000291
Family Ovomucoid domain III-like 0.0094
Further Details:      
 
Domain Number 7 Region: 511-560
Classification Level Classification E-value
Superfamily Kazal-type serine protease inhibitors 0.000000000000485
Family Ovomucoid domain III-like 0.0075
Further Details:      
 
Domain Number 8 Region: 796-865
Classification Level Classification E-value
Superfamily Kazal-type serine protease inhibitors 0.000000000000527
Family Ovomucoid domain III-like 0.0099
Further Details:      
 
Domain Number 9 Region: 1041-1111
Classification Level Classification E-value
Superfamily SEA domain 0.0000000000034
Family SEA domain 0.0031
Further Details:      
 
Domain Number 10 Region: 594-645
Classification Level Classification E-value
Superfamily Kazal-type serine protease inhibitors 0.00000000000402
Family Ovomucoid domain III-like 0.0043
Further Details:      
 
Domain Number 11 Region: 293-357
Classification Level Classification E-value
Superfamily Kazal-type serine protease inhibitors 0.0000000000393
Family Ovomucoid domain III-like 0.0058
Further Details:      
 
Domain Number 12 Region: 688-731
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000017
Family Laminin-type module 0.0048
Further Details:      
 
Domain Number 13 Region: 143-213
Classification Level Classification E-value
Superfamily Kazal-type serine protease inhibitors 0.000000000194
Family Ovomucoid domain III-like 0.0068
Further Details:      
 
Domain Number 14 Region: 236-284
Classification Level Classification E-value
Superfamily Kazal-type serine protease inhibitors 0.000000000471
Family Ovomucoid domain III-like 0.012
Further Details:      
 
Domain Number 15 Region: 1443-1478
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000373
Family EGF-type module 0.045
Further Details:      
 
Domain Number 16 Region: 742-779
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000046
Family Laminin-type module 0.0097
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000060444   Gene: ENSRNOG00000020205   Transcript: ENSRNOT00000066157
Sequence length 1960
Comment pep:known chromosome:RGSC3.4:5:172999424:173020563:-1 gene:ENSRNOG00000020205 transcript:ENSRNOT00000066157 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MPPLPLEHRPRQEPGASMLVRYFMIPCNICLILLATSTLGFAVLLFLSNYKPGIHFTPAP
PTPPDVCRGMLCGFGAVCEPSVEDPGRASCVCKKNACPATVAPVCGSDASTYSNECELQR
AQCNQQRRIRLLRQGPCGSRDPCANVTCSFGSTCVPSADGQTASCLCPTTCFGAPDGTVC
GSDGVDYPSECQLLSHACASQEHIFKKFNGPCDPCQGSMSDLNHICRVNPRTRHPEMLLR
PENCPAQHTPICGDDGVTYENDCVMSRIGATRGLLLQKVRSGQCQTRDQCPETCQFNSVC
LSRRGRPHCSCDRVTCDGSYRPVCAQDGHTYNNDCWRQQAECRQQRAIPPKHQGPCDQTP
SPCHGVQCAFGAVCTVKNGKAECECQRVCSGIYDPVCGSDGVTYGSVCELESMACTLGRE
IQVARRGPCDPCGQCRFGSLCEVETGRCVCPSECVESAQPVCGSDGHTYASECELHVHAC
THQISLYVASAGHCQTCGEKVCTFGAVCSAGQCVCPRCEHPPPGPVCGSDGVTYLSACEL
REAACQQQVQIEEAHAGPCEPAECGSGGSGSGEDDECEQELCRQRGGIWDEDSEDGPCVC
DFSCQSVPRSPVCGSDGVTYGTECDLKKARCESQQELYVAAQGACRGPTLAPLLPVAFPH
CAQTPYGCCQDNFTAAQGVGLAGCPSTCHCNPHGSYSGTCDPATGQCSCRPGVGGLRCDR
CEPGFWNFRGIVTDGHSGCTPCSCDPRGAVRDDCEQMTGLCSCRPGVAGPKCGQCPDGQV
LGHLGCEADPMTPVTCVEIHCEFGASCVEKAGFAQCICPTLTCPEANSTKVCGSDGVTYG
NECQLKAIACRQRLDISTQSLGPCQESVTPGASPTSASMTTPRHILSKTLPFPHNSLPLS
PGSTTHDWPTPLPISPHTTVSIPRSTAWPVLTVPPTAAASDVTSLATSIFSESGSANGSG
DEELSGDEEASGGGSGGLEPPVGSIVVTHGPPIERASCYNSPLGCCSDGKTPSLDSEGSN
CPATKAFQGVLELEGVEGQELFYTPEMADPKSELFGETARSIESTLDDLFRNSDVKKDFW
SVRLRELGPGKLVRAIVDVHFDPSKPLFPSREMMGPSSPQPQPSRHQALAVRRPLQEHVR
FLDFDWFPTFFTGAATGTTAAMATARATTVSRLPASSVTPRVYPSHTSRPVGRTTAPPTT
RRPPTTATNMDRPRTPGHQQPSKSCDSQPCLHGGTCQDQDSGKGFTCSCTAGRGGSVCEK
VQPPSMPAFKGHSFLAFPTLRAYHTLRLALEFRALETEGLLLYNGNARGKDFLALALLDG
RVQFRFDTGSGPAVLTSLVPVEPGRWHRLELSRHWRQGTLSVDGETPVVGESPSGTDGLN
LDTNLYVGGIPEEQVAMVLDRTSVGVGLKGCIRMLDINNQQLELSDWQRAAVQSSGVGEC
GDHPCLPNPCHGGALCQALEAGMFLCQCPPGRFGPTCADEKSPCQPNPCHGAAPCRVLSS
GGAKCECPLGRSGTFCQTVLETAGSRPFLADFNGFSYLELKGLHTFERDLGEKMALEMVF
LARGPSGLLLYNGQKTDGKGDFVSLALHNRHLEFCYDLGKGAAVIRSKEPIALGTWVRVF
LERNGRKGALQVGDGPRVLGESPKSRKVPHTMLNLKEPLYIGGAPDFSKLARGAAVSSGF
NGVIQLVSLRGHQLLTQEHVLRAVDVSPFADHPCTQALGNPCLNGGSCVPREATYECLCP
GGFSGLHCEKGLVEKSVGDLETLAFDGRTYIEYLNAVIESELTNEIPAPETLDSRALFSE
KALQSNHFELSLRTEATQGLVLWIGKAAERADYMALAIVDGHLQLSYDLGSQPVVLRSTV
KVNTNRWLRIRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQAL
PKAYGTGFVGCLRDVVVGHRQLHLLEDAVTKPELRPCPTP
Download sequence
Identical sequences ENSRNOP00000060444 10116.ENSRNOP00000050623

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.