SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMMUP00000019794 from Macaca mulatta 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMMUP00000019794
Domain Number 1 Region: 437-694
Classification Level Classification E-value
Superfamily YWTD domain 8.37e-49
Family YWTD domain 0.000000105
Further Details:      
 
Domain Number 2 Region: 31-68
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000000288
Family LDL receptor-like module 0.00072
Further Details:      
 
Domain Number 3 Region: 148-188
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000126
Family LDL receptor-like module 0.0008
Further Details:      
 
Domain Number 4 Region: 270-306
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000157
Family LDL receptor-like module 0.00049
Further Details:      
 
Domain Number 5 Region: 70-108
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000038
Family LDL receptor-like module 0.00053
Further Details:      
 
Domain Number 6 Region: 187-225
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000011
Family LDL receptor-like module 0.00098
Further Details:      
 
Domain Number 7 Region: 107-149
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000236
Family LDL receptor-like module 0.00019
Further Details:      
 
Domain Number 8 Region: 234-268
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000628
Family LDL receptor-like module 0.0009
Further Details:      
 
Domain Number 9 Region: 390-430
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000729
Family EGF-type module 0.0012
Further Details:      
 
Domain Number 10 Region: 354-397
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000102
Family EGF-type module 0.0031
Further Details:      
 
Domain Number 11 Region: 312-349
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000393
Family LDL receptor-like module 0.00036
Further Details:      
 
Domain Number 12 Region: 698-744
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000115
Family EGF-type module 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMMUP00000019794   Gene: ENSMMUG00000015093   Transcript: ENSMMUT00000021168
Sequence length 867
Comment pep:known chromosome:MMUL_1:15:74586509:74619095:-1 gene:ENSMMUG00000015093 transcript:ENSMMUT00000021168 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGTSARWALWLLLALCWAPWESGATGTGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCVD
GSDEKNCVKKTCAESDFVCNNGQCVPNRWKCDGDPDCEDGSDESPEQCHMRTCRINEISC
AAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPSEFTCSSGRCISRNFVCNGQDDCS
DGSDELDCAPPTCGVHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVIHTKCP
ASEIQCGSGECIHKKWRCDGDPDCKDGTSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDG
SDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGG
CSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQ
MDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWA
DLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTK
RKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGIT
LDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEA
VYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMENGGCEYLCLPAPQIN
DHSPKYTCSCPNGFNLEENGRDCQSTATTVTYSETKDTNTTEISPTSGLVPGGINVTTAV
SEVSVPPKGTSAAWAILPLLLLVMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLS
IDIGRHSASVGHTYPAISVVSTDDDLA
Download sequence
Identical sequences 9544.ENSMMUP00000019794 ENSMMUP00000019794 ENSMMUP00000019791

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]