SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSMMUP00000023875 from Macaca mulatta 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSMMUP00000023875
Domain Number 1 Region: 43-417
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 1.96e-47
Family Integrin alpha N-terminal domain 0.013
Further Details:      
 
Domain Number 2 Region: 542-596
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000502
Family EGF-type module 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMMUP00000023875   Gene: ENSMMUG00000018154   Transcript: ENSMMUT00000025518
Sequence length 651
Comment pep:known_by_projection chromosome:MMUL_1:9:97460460:97607906:-1 gene:ENSMMUG00000018154 transcript:ENSMMUT00000025518 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSRMFLLLLWFLPITEGSQRAEPMFTAVTNSVLPPDYDSNPTQLNYGVAVTDVDHDGDFE
IVVAGYNGPNLVLKYDRAQKRLVNIAVDERSSPYYALRDRQGNAIGVTACDIDGDGREEI
YFLNTNNAFSGVATYTDKLFKFRNNRWEDILSDEVNVARGVASLFAGRSVACVDRKGSGR
YSIYIANYAYGNVGPDALIEMDPEASDLSQGILALRDVAAEAGVSKYTGGRGVSVGPILS
SSASDIFCDNENGPNFLFHNRGDGTFVDAAASAGVDDPHQHGRGVALADFNRDGKVDIVY
GNWNGPHRLYLQMSAHGKAHFRDIASPKFSMPSPVRTVITADFDNDQELEIFFNNIAYRS
SSANRLFRVIRREHGDPLIEELNPGDALEPEGRGTGGVVTDFDGDGMLDLILSHGESMAQ
PLSVFRGNQGFNNNWLRVVPRTRFGAFARGAKVVLYTKKSGAHLRIIDGGSGYLCEMEPV
AHFGLGKDEASSVEVTWPDGKMVSRNVASGEMNSVLEIPYPRDEDTLQNPAPLECGQGFS
QQENGHCMDTNECIQFPFVCPRDKPVCVNTYGSYRCRTNKRCSRGYEPNEDGTACVGTLG
QSPGPRPTTPTAAAATATAAAAAGAATAAPVLVDGDLNLGSAVKENCEPSC
Download sequence
Identical sequences ENSMMUP00000023876 9544.ENSMMUP00000023875 ENSMMUP00000023875

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