SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMMUP00000038540 from Macaca mulatta 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMMUP00000038540
Domain Number 1 Region: 392-454
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 6.06e-22
Family LIM domain 0.0071
Further Details:      
 
Domain Number 2 Region: 451-513
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.08e-18
Family LIM domain 0.0024
Further Details:      
 
Domain Number 3 Region: 510-572
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 2.36e-18
Family LIM domain 0.0035
Further Details:      
 
Domain Number 4 Region: 569-598
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000000989
Family LIM domain 0.019
Further Details:      
 
Weak hits

Sequence:  ENSMMUP00000038540
Domain Number - Region: 365-390
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00234
Family LIM domain 0.0095
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMMUP00000038540   Gene: ENSMMUG00000009159   Transcript: ENSMMUT00000045507
Sequence length 599
Comment pep:novel chromosome:MMUL_1:11:121212179:121225962:-1 gene:ENSMMUG00000009159 transcript:ENSMMUT00000045507 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
DALLADLESTTSHISKRPVFLSEETPYSYPTGNHTYQEIAVPPPVPPPPSSEALNGTILD
PLDQWQPSGSRFIHQQPQSSSPVYGSSAKTSSASNPQDSVGSPCSRVGEEEHVYSFPNKQ
KSAEPSPTVMSTSLGSNLSELDRLLLELNAVQHNPPGFPADEANSSPPLPGALSPHYGVP
ETNSPLGGKAGPLTKEKPKRNGGRGLEDVRPSVESLLDELESSVPSPVPAITVNQGEMSS
PQRVTSTQQQTRISASSATRELDELMASLSDFKGSWPLEEVVLLVSISSSVQEGEKYPHP
FAARHRTLSLRSPDQPVSPQFMAQGKTGSSSPPGGPPKPGSQLDSMLGSLQSDLNKLGVA
TVAKGVCGACKKPIAGQVVTAMGRRHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNL
FSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMF
APKCGGCARAILENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRG
SLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCFLKLFC
Download sequence
Identical sequences ENSMMUP00000038540

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]