SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for YER007W from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  YER007W
Domain Number 1 Region: 95-339
Classification Level Classification E-value
Superfamily RNI-like 7.85e-30
Family 28-residue LRR 0.021
Further Details:      
 
Domain Number 2 Region: 2-133
Classification Level Classification E-value
Superfamily Cap-Gly domain 4.45e-24
Family Cap-Gly domain 0.002
Further Details:      
 
Domain Number 3 Region: 425-503
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.0000000000659
Family Ubiquitin-related 0.0091
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Locus: YER007W   Protein: S000000809
Sequence length 518
Comment PAC2 SGDID:S000000809, Chr V from 164526-166082, Verified ORF, "Microtubule effector required for tubulin heterodimer formation, binds alpha-tubulin, required for normal microtubule function, null mutant exhibits cold-sensitive microtubules and sensitivity to benomyl"
Sequence
MTYEIGDRLKIGGYFCTIKFIGVIKPWPSVKAYGVEWDDHSRGKHSGTIDDIHYFDVQIP
NSGSFLKESKIKSPGVRRITFYEALSEKYGGSSNNINDLSIGNKRVEGLGFDELNARNKN
YKKLRKIALRDSDVAILFQNQDELNRVIQNCVNVKDLDLSLNLFTNINSLCEFIEPLKNL
ESLNISQNKLLSGWDNLKEYDLSHIKTLRLSSCGLSYKHIGKLLKSFRTLKMLDLSYNNL
TSAGIQNFENEIPCTLEELNISGNNLISFPLFPKNLTLKGLNVSNNQISRAPSIAIYSVE
SLDITDNKFKERSLIDDLNKTFPSLKNIHLSGNEFNYNGNYINVEEQATFYEVLARFDRV
MVLNGSICDVKTRREAEMFFVSKVMNNELSYDTNLPRWSSLIKSYEIDMSKLSFNNERET
RQSLVLKIKIRAGKKPSSDLDYWVLPSFTVRYVKSVICRKLNFDILNVKLFHENSEGMIN
EIKYNFRPISDFNVVNGDIIHVSSPVNNKSIQKVNSPS
Download sequence
Identical sequences N1P3W8 P39937
YER007W YER007W YER007W 4932.YER007W YER007W YER007W NP_010922.1.97178

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]