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Domain assignment for YKR094C from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YKR094C
Domain Number 1 Region: 1-87
Classification Level Classification E-value
Superfamily Ubiquitin-like 9.63e-64
Family Ubiquitin-related 0.0071
Further Details:      
 
Domain Number 2 Region: 76-128
Classification Level Classification E-value
Superfamily Zn-binding ribosomal proteins 1.64e-17
Family Ribosomal protein L40e 0.0085
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Locus: YKR094C   Protein: S000001802
Sequence length 128
Comment RPL40B SGDID:S000001802, Chr XI from 618392-618385,618016-617638, reverse complement, Verified ORF, "Fusion protein, identical to Rpl40Ap, that is cleaved to yield ubiquitin and a ribosomal protein of the large (60S) ribosomal subunit with similarity to rat L40; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes"
Sequence
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLKALASKYNCDKSVCRKCYARLPPRATNCRKRKCGHTNQ
LRPKKKLK
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Identical sequences A0A0L8VLJ1 A0A1X7R9K8 A0A250WM05 A6ZVC8 B3LRG8 C8ZAW5 G2WG04 H2AYM5 N1P2T8 P0CH08 P0CH09
YIL148W YKR094C YIL148W YKR094C YIL148W YKR094C YIL148W YKR094C YIL148W YKR094C YIL148W YKR094C YIL148W YIL148W YKR094C YIL148W SCRT_04110 SCRT_05321 NP_012118.1.97178 NP_013020.3.97178 XP_003957005.1.94514 XP_003958566.1.94514 4932.YIL148W 4932.YKR094C YIL148W YKR094C YKR094C YIL148W YKR094C YIL148W YKR094C YIL148W YKR094C YIL148W YKR094C 3j6x_80 3j6y_80 3j77_90 3j78_90 4v88_Bm 4v88_Dm 4v8t_m 4v8y_Bm 4v8z_Bm 4v91_m 5apn_m 5apo_m 5gak_o 5juo_RA 5jup_RA 5jus_RA 5jut_RA 5juu_RA 5mc6_AO 5t62_z 5t6r_z 6ef3_u YIL148W YIL148W YKR094C YIL148W YKR094C YIL148w___KOG0003 YIL148W YKR094C YIL148W YKR094C tr|A6ZVC8|A6ZVC8_YEAS7 YIL148W YKR094C YIL148W YIL148W YKR094C YIL148W YKR094C YIL148W YKR094C

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