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Domain assignment for jgi|Physo1_1|129379|estExt_fgenesh1_pg.C_70204 from Phytophthora sojae 1.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Physo1_1|129379|estExt_fgenesh1_pg.C_70204
Domain Number 1 Region: 172-243
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000000000128
Family RING finger domain, C3HC4 0.014
Further Details:      
 
Domain Number 2 Region: 71-98
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00000863
Family CCCH zinc finger 0.0028
Further Details:      
 
Weak hits

Sequence:  jgi|Physo1_1|129379|estExt_fgenesh1_pg.C_70204
Domain Number - Region: 119-139
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000114
Family CCCH zinc finger 0.0054
Further Details:      
 
Domain Number - Region: 270-296
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00127
Family CCCH zinc finger 0.0034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Physo1_1|129379|estExt_fgenesh1_pg.C_70204
Sequence length 378
Sequence
MRRSTSRSRYSASASARGASTERDRVFDNLQRRLAAQDLSDRGAEAEDVYEDKRSVPQAA
RSSPAAAAAVPTTALCRFFVLGKCRYGSRCTYSHALPEQVSECAADEAEGLSAAAALVDC
PFFLRGNCKYGEHCRLRHNPAMLLGAATSARAAPRAGRPSGAGYTSSNNAAVNATAATRE
DNQQDFTCGICFDDIIQSGKHFGLLSCDHCFCLDCLREWRQSKDMELEVIRACPACRVPS
DFIVPSLIFCKGEEKRKVVEAYKSHLALRECKYFNGLFGSCPFGPRCFYAHRDAEGRDVK
HLDRPKRSMKPRRGRNGRQGGDAALQSLLQQYSHLFRFFEVADWDDFDLVGGLYDSDDSD
DDYFEYNYGFSDDEFDSD
Download sequence
Identical sequences 67593.JGI129379 jgi|Physo1_1|129379|estExt_fgenesh1_pg.C_70204

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