SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Domain assignment for gi|15897437|ref|NP_342042.1| from Sulfolobus solfataricus P2

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  gi|15897437|ref|NP_342042.1|
Domain Number 1 Region: 54-103
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.0000818
Family YlxM/p13-like 0.082
Further Details:      
Weak hits

Sequence:  gi|15897437|ref|NP_342042.1|
Domain Number - Region: 39-57
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00597
Family Classic zinc finger, C2H2 0.033
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|15897437|ref|NP_342042.1|
Sequence length 269
Comment second ORF in transposon ISC1173 [Sulfolobus solfataricus P2]
Download sequence
Identical sequences A0A157SY68 Q97ZR7
SsR32 gi|15897437|ref|NP_342042.1| 273057.SSO0511

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]