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Domain assignment for gi|15897637|ref|NP_342242.1| from Sulfolobus solfataricus P2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|15897637|ref|NP_342242.1|
Domain Number 1 Region: 67-157
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.18e-20
Family Cold shock DNA-binding domain-like 0.0000148
Further Details:      
 
Domain Number 2 Region: 153-234
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.00000000000002
Family Eukaryotic type KH-domain (KH-domain type I) 0.0000135
Further Details:      
 
Domain Number 3 Region: 8-65
Classification Level Classification E-value
Superfamily Ribosomal L27 protein-like 0.0000000000000322
Family ECR1 N-terminal domain-like 0.0000352
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|15897637|ref|NP_342242.1|
Sequence length 249
Comment exosome complex RNA-binding protein Rrp4 [Sulfolobus solfataricus P2]
Sequence
MNMSQSQKIVLQPRSIVVPGELLAEGEFQIPWSPYILKINSKYYSTVVGLFDVKDTQFEV
IPLEGSFYYPKINDIVIGLVEDVEIYGWVVDIKAPYKAYLPASNLLGRSINVGEDLRRYL
DVGDYVIARIENFDRSIDPVLSVKGKDLGRVSNGIVIDIMPVKVPRVIGKNKSMYETLTS
KSGCSIFVANNGRIWATCPSRFSEEILIEAIRKIENESHIKGLTDRIKQFIEEKLGERNA
SSGETKTNS
Download sequence
Identical sequences A0A157SZ15 Q9UXC4
gi|15897637|ref|NP_342242.1| 273057.SSO0736 3l7z_C 3l7z_F 3l7z_I

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