SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 100226.SCO6053 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  100226.SCO6053
Domain Number 1 Region: 54-187
Classification Level Classification E-value
Superfamily Band 7/SPFH domain 3.4e-41
Family Band 7/SPFH domain 0.0026
Further Details:      
 
Weak hits

Sequence:  100226.SCO6053
Domain Number - Region: 171-240
Classification Level Classification E-value
Superfamily OmpH-like 0.017
Family OmpH-like 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 100226.SCO6053
Sequence length 262
Comment (Streptomyces coelicolor)
Sequence
MVQELLTAAAAVGSAGVLYVASAARVVKQYERGVVFRLGRLAGQARGPGFTMIVPFVDRL
HKVNMQIITLPVPAQEGITRDNVTVRVDAVVYFKVVDAANALVRVEDYRFAVSQMAQTSL
RSIIGKSDLDDLLSDREKLNQGLELMIDSPAVGWGVQIDRVEIKDVSLPDTMKRSMARQA
EADRERRARVINADAELQASKVLAEAAREMSETPAALQLRLLQTVVAVAAEKNSTLVLPF
PVELLRFLEKAQEHPVEHRVER
Download sequence
Identical sequences D6ELQ4 O69841
NP_630163.1.49638 WP_003972868.1.26049 WP_003972868.1.43399 WP_003972868.1.55229 WP_003972868.1.86682 100226.SCO6053 gi|21224384|ref|NP_630163.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]