SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 10116.ENSRNOP00000005849 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  10116.ENSRNOP00000005849
Domain Number 1 Region: 10-128
Classification Level Classification E-value
Superfamily POZ domain 1.69e-29
Family BTB/POZ domain 0.00078
Further Details:      
 
Domain Number 2 Region: 441-493
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.67e-17
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 3 Region: 420-450
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000143
Family Classic zinc finger, C2H2 0.0087
Further Details:      
 
Domain Number 4 Region: 377-405
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000977
Family Classic zinc finger, C2H2 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 10116.ENSRNOP00000005849
Sequence length 531
Comment (Rattus norvegicus)
Sequence
MCPKGYEDSMEFPDHSRHLLQCLSEQRHQGFLCDCTVLVGDAQFRAHRAVLASCSMYFHL
FYKDQLDKRDIVHLNSDIVTAPAFALLLEFMYEGKLQFKDLPIEDVLAAASYLHMYDIVK
VCKKKLKEKATTEADSTKKEEDASSCSDKVESLSDGSSHMAGDLPSDEDEGEDDKLNILP
SKRDLAAEPGNMWMRLPSDAAGIPQAGGEAEPHATAAGKTVASPCSSTESLSQRSVTSVR
DSADVDCVLDLSVKSSLSGVENLNSSYFSSQDVLRSNLVQVKVEKEASCDESDVGTNDYD
MEHSTVKESVSANNRVQYEPAHLAPLREDSVLRELDREDKASDDEMMTPESERVQVEGGM
ESSLLPYVSNILSPAGQIFMCPLCNKVFPSPHILQIHLSTHFREQDGIRSKPAADVNVPT
CSLCGKTFSCMYTLKRHERTHSGEKPYTCTQCGKSFQYSHNLSRHAVVHTREKPHACKWC
ERRFTQSGDLYRHIRKFHCELVNSLSVKSEALSLPTVRDWTLEDSSQELWK
Download sequence
Identical sequences XP_006250390.1.100692 XP_008768019.1.100692 XP_008768020.1.100692 10116.ENSRNOP00000005849 ENSRNOP00000005849

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]