SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 10116.ENSRNOP00000031387 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  10116.ENSRNOP00000031387
Domain Number 1 Region: 31-365,402-433
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.1e-40
Family WD40-repeat 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 10116.ENSRNOP00000031387
Sequence length 460
Comment (Rattus norvegicus)
Sequence
MLRWLIGGGREPQGLAEKAALQTIGEDQGQNPYTELLVLKAHRDIVRFLVQLDGYRFASA
GDDGIIVVWNAQTGEKLLELRGHTQKITAVITFLPLDSCEASSQLLLTASADRTVGVWDC
DTGRQIQRVTCFQSTVKCLAVLQRLDVWLSGGSDLGVWSRKLDLLCKTSHLSDTGISALV
EIPGNCVAAAVGRELIIFRLVTPTEELLEWDIIEVKRLLDHQDNILSLANINDTSFVTGS
HVGELIIWDALDWTVQACERTFWSPTPQLDAQQEIKLCQKQNDIPVNHFACDEENVFAAV
GRGLYVYNLQLKRVIACQKTAHDSNILHIDKLPNRQLISCSEDGAVRMWEVREKQQLAAE
PVPTGFFNMWGFGRVNKQANQPVKKQEENVTTCSLELIGDLIGHSSSVEMFLYFEDHGLV
TCSADHLIILWKNGERESGLRSLKLFQKLEENGDLYPEST
Download sequence
Identical sequences B2RYI7
RnR66 ENSRNOP00000031387 10116.ENSRNOP00000031387

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]