SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 10116.ENSRNOP00000035315 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  10116.ENSRNOP00000035315
Domain Number 1 Region: 398-557,637-768
Classification Level Classification E-value
Superfamily L domain-like 2.31e-55
Family Ngr ectodomain-like 0.0015
Further Details:      
 
Domain Number 2 Region: 1033-1222
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.35e-44
Family Laminin G-like module 0.0026
Further Details:      
 
Domain Number 3 Region: 167-373
Classification Level Classification E-value
Superfamily L domain-like 2.42e-43
Family Ngr ectodomain-like 0.00031
Further Details:      
 
Domain Number 4 Region: 2-132
Classification Level Classification E-value
Superfamily L domain-like 7.48e-33
Family Ngr ectodomain-like 0.0024
Further Details:      
 
Domain Number 5 Region: 891-934
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000148
Family EGF-type module 0.0094
Further Details:      
 
Domain Number 6 Region: 810-849
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000219
Family EGF-type module 0.0057
Further Details:      
 
Domain Number 7 Region: 931-1047
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000549
Family Growth factor receptor domain 0.012
Further Details:      
 
Domain Number 8 Region: 851-895
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000135
Family EGF-type module 0.0081
Further Details:      
 
Weak hits

Sequence:  10116.ENSRNOP00000035315
Domain Number - Region: 1218-1258
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000132
Family EGF-type module 0.022
Further Details:      
 
Domain Number - Region: 1263-1297
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000212
Family EGF-type module 0.023
Further Details:      
 
Domain Number - Region: 1308-1338
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000723
Family EGF-type module 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 10116.ENSRNOP00000035315
Sequence length 1417
Comment (Rattus norvegicus)
Sequence
RLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEE
GAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRP
TIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMCSCSNGIVD
CRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQ
GLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYD
NKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLAN
KRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSGLKLSKI
PERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSEL
HLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISP
GAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAF
PDFRCEEGQEEVGCLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKNVTELYLDGNQFT
LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSL
RLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCA
GPPEMEGKLLLTTPAKKFECQGPPSLAVQAKCDPCLSSPCQNQGTCHNDPLEVYRCTCPS
GYKGRNCEVSLDSCSSNPCGNGGTCHAQEGEDAGFTCSCPSGFEGLTCGMNTDDCVKHDC
VNGGVCVDGIGNYTCQCPLQYTGRACEQLVDFCSPDLNPCQHEAQCVGTPEGPRCECVPG
YTGDNCSKNQDDCKDHQCQNGAQCVDEINSYACLCAEGYSGQLCEIPPAPRNSCEGTECQ
NGANCVDQGSRPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTA
EDNGILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQM
VNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNL
YINNELQDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATPGPVCHCEAGWGGLHCDQPV
DGPCHGHKCVHGKCVPLDALAYSCQCQDGYSGALCNQVGAVAEPCGGLQCLHGHCQASAT
RGAHCVCSPGFSGELCEQESECRGDPVRDFHRVQRGYAICQTTRPLSWVECRGACPGQGC
CQGLRLKRRKLTFECSDGTSFAEEVEKPTKCGCAPCA
Download sequence
Identical sequences 10116.ENSRNOP00000035315 ENSRNOP00000035180

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]