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  Home > Genomes > STRING v9.0.5 > 10116.ENSRNOP00000063713

Domain assignment for 10116.ENSRNOP00000063713 from STRING v9.0.5

Domain architecture

Domain assignment details

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Strong hits

Sequence:  10116.ENSRNOP00000063713
Domain Number 1 Region: 6-213
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 9.75e-70
Family Calponin-homology domain, CH-domain 0.000000877
Further Details:      
 
Domain Number 2 Region: 3054-3177
Classification Level Classification E-value
Superfamily EF-hand 7.91e-53
Family EF-hand modules in multidomain proteins 0.000000572
Further Details:      
 
Domain Number 3 Region: 3179-3275
Classification Level Classification E-value
Superfamily EF-hand 6.8e-40
Family EF-hand modules in multidomain proteins 0.00000394
Further Details:      
 
Domain Number 4 Region: 974-1130
Classification Level Classification E-value
Superfamily Spectrin repeat 3.18e-24
Family Spectrin repeat 0.0046
Further Details:      
 
Domain Number 5 Region: 2029-2186
Classification Level Classification E-value
Superfamily Spectrin repeat 2.81e-21
Family Spectrin repeat 0.0053
Further Details:      
 
Domain Number 6 Region: 3255-3343
Classification Level Classification E-value
Superfamily RING/U-box 3.06e-21
Family ZZ domain 0.0092
Further Details:      
 
Domain Number 7 Region: 2494-2655
Classification Level Classification E-value
Superfamily Spectrin repeat 5.49e-20
Family Spectrin repeat 0.01
Further Details:      
 
Domain Number 8 Region: 1081-1241
Classification Level Classification E-value
Superfamily Spectrin repeat 2.59e-19
Family Spectrin repeat 0.0063
Further Details:      
 
Domain Number 9 Region: 2720-2847
Classification Level Classification E-value
Superfamily Spectrin repeat 3.84e-18
Family Spectrin repeat 0.005
Further Details:      
 
Domain Number 10 Region: 316-425
Classification Level Classification E-value
Superfamily Spectrin repeat 8.9e-18
Family Spectrin repeat 0.0036
Further Details:      
 
Domain Number 11 Region: 1191-1345
Classification Level Classification E-value
Superfamily Spectrin repeat 1.22e-17
Family Spectrin repeat 0.0042
Further Details:      
 
Domain Number 12 Region: 2870-3008
Classification Level Classification E-value
Superfamily Spectrin repeat 2.22e-17
Family Spectrin repeat 0.0074
Further Details:      
 
Domain Number 13 Region: 1497-1652
Classification Level Classification E-value
Superfamily Spectrin repeat 5.26e-17
Family Spectrin repeat 0.0053
Further Details:      
 
Domain Number 14 Region: 394-533
Classification Level Classification E-value
Superfamily Spectrin repeat 2.09e-16
Family Spectrin repeat 0.0033
Further Details:      
 
Domain Number 15 Region: 500-638
Classification Level Classification E-value
Superfamily Spectrin repeat 6.81e-16
Family Spectrin repeat 0.0045
Further Details:      
 
Domain Number 16 Region: 2243-2390
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000000136
Family Spectrin repeat 0.008
Further Details:      
 
Domain Number 17 Region: 754-877
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000208
Family Spectrin repeat 0.0079
Further Details:      
 
Domain Number 18 Region: 1626-1750
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000475
Family Spectrin repeat 0.0096
Further Details:      
 
Domain Number 19 Region: 1801-1943
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000006
Family Spectrin repeat 0.0056
Further Details:      
 
Domain Number 20 Region: 3016-3053
Classification Level Classification E-value
Superfamily WW domain 0.0000000000341
Family WW domain 0.00012
Further Details:      
 
Domain Number 21 Region: 2423-2511
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000108
Family Spectrin repeat 0.0048
Further Details:      
 
Weak hits

Sequence:  10116.ENSRNOP00000063713
Domain Number - Region: 896-988
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000288
Family Spectrin repeat 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 10116.ENSRNOP00000063713
Sequence length 3654
Comment (Rattus norvegicus)
Sequence 
WLDKNFYKFGKQHIDNLFSDLQDGKRLLDLLEGLTGQKLPKEKGSTRVHALNNVNKALQV
LQKNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKTIMAGLQQTNSEKILLSW
VRESTRNYPQVNVLNFTSSWSDGLALNALIHSHRPDLFDWNSVVSQQSATQRLEHAFNIA
KCQLGIEKLLDPEDVATTYPDKKSILMYITSLFQVLPQQVSIEAIREVEMLPRPSKVTRE
EHFQLHHQMHYSQQITVSLAQGYEQTSSSPKPRFKSYAFTQAAYVATSDSSQSPYPSQHL
EAPGSKSFGSSLIETEVNLDSYQTALEEVLSWLLSAEDTLRAQGEISKDVEEVKEQFHAH
EGFMMDLTSHQGLVGNVLQLGSRLVGKGKLTEDEETEVQEQMNLLNSRWECLRVASMEKQ
SNLHKVLMDLQNQKLKELDDWLTKTEERTKKMEEEPLGPDLEDLKCQVQQHKVLQEDLEQ
EQVRVNSLTHMVVVVDESSGDHATAALEEQLKVLGDRWANICKWTEDRWILLQDILLKWQ
RFTEEQCLFSKWLSEKEDAMKNIQTSGFEDQNEMVSSLQNISALKIDLEKKKQSMEKLSS
LNQDLLSALKNKSVTQKMEMWMENFAQRWDNLTQKLEKSSAQISQAVTTTQPSLTQTTVM
ETVTMVTTREQIMVKHAQEELPPPPPQKKRQITVDSEIRKRLDVDITELHSWITRSEAVL
QSSEFAVYRKEGNISDLKEKVNAIAREKAEKFRKLQDASRSAQALVEQMVNEGVNAESIR
QASEQLNSRWTEFCQLLSERVNWLEYQNNIITFYNQLQQLEQMTTTAENLLKTQPTTLSE
PTAIKSQLKICKDEVNRLSALQPQIERLKIQSLTLKEKGQGPMFLDADFVAFTNHFNYVF
DGVRAREKELQTIFDTLPPMRYQETMSSIRTWIQQSENKLSIPHLSVTEYEIMEERLGKL
QALQSSLKEQQNGFNYLNATVKEIAKKAPSEISQKYQSEFEEVEGRWKKLSTQLVEHCQK
LEEHMNKLRKFQNHKKTLQKWMAEVDVFLKEEWPALGDAEILKKQLKQCRLLVGDIQTIQ
PSLNSVNEGGQKIKSEAEFEFASRLEKELKELNTQWDHICRQVYTRKEALKAGLDKTVSL
QKDLSEMHEWMTQAEEEYLERDFEYKTPDELQTAVEEMKRAKEEALQKEAKVKLLTETVN
SVISQAPPAAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHELLSYLEKANKWL
NEVELKLKATENVPAGAEEITEVLESLENLMHHSEENPNQIRLLAQTLTDGGVMDELINE
ELETFNSRWRELHEEAVRKQKLLEQSIQSAQEIEKSLHLIQESLEFIDKQLAAYIADKVD
AAQMPQEAQKIQSDLTSHEISLEEMKKHNQGKDANQRVLSQIDVAQKKLQDVSIKFRLFQ
KPANFEQRLEESKMILDEVKMHLPALETKSVEQEVVQSQLSHCVNLYKSLSEVKSEVEMV
IKTGRQIVQKKQTENPKELDERVTALKLHYNELGAKVTERKQQLEKCLKLSRKMRKEMNV
LTEWLAATDTELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKAHLKSVTELGDSLKTVL
GKKETLVEDKLTLLNSNWIAVTSRVEEWLNLLLEYQKHMESFDQNVEHITKWIIHTDELL
DESEKRKPQQKEDILKRLKAEMNDIRPKVDATRDQAAKLMANRGDYCRKIVEPQISELNR
RFAAISHRIKTGKASIPLKELEQFNSDIQKLLEPLEAEIQQGVNLKEEDFNKDMSEDNEG
TVNELLQRGDNLQQRITDERKREEIKLKQQLLQTKHNALKDLRSQRRKKALEISHQWYQY
KSQADDLLKCLDEIEKKLASLPEPRDERKIKEIDRELQKKKEELNAVRRQAESLSENGAA
MAVEPTQIQLSKRWREIESNFAQFRRLNFAQIHTLHEETMVVTTEDMPLDVSYVPSTYLT
EISHILQALSEVEQLLNAPELNAKDFEDLFKQEESLKNIKENLQQISGRIDVIHKKKTAA
LQSATPMERVKLQEAVSQMDFHWEKLNRMYKERQGRFDRSVEKWRHFHYDMKVFNQWLND
VEQFFKKTQNPENWEHAKYKWYLKELQDGIGQRQAVVRTLNATGEEIIQQSSKTDANILQ
EKLGSLSLRWHEVCKELAERRKRVEEQKNVFSEFQRDLNEFVSWLEEADNIATTPPGDEE
QLKEKLEQVKLLTEELPLRQGILKQLNETGGAVLVSAPIRPEEQDKLEKKLKQTNLQWIK
VSRALPEKQGELEVHIKDFRQFEEQLDHLLLWLSPIRNQLEIYNQPSQPGPFDLKETEVT
VQAKQPDVERLLSKGQHLYKEKPSTQPVKRKLEDLRSEWEAVNHLLWELRTKQPDRAPGL
STTGASASQTVTVVTQPVDTKETVISKLEMPSSLLLEVPALADFNRAWTELTDWLSLLDR
VIKSQRVMVGDLEDINEMIIKQKATLQDLEQRRPQLEELITAAQNLKNKTSNQEARTIIT
DRIERIQIQWDEVQEQLQNRRQQLNEMLKDSTQWLEAKEEAEQVIGQARGKLDSWKEGPH
TMDAIQKKITETKQLAKDLRQRQINVDVANDLALKLLRDYSADDTRKVHMITENINTSWG
NILKRVSEREAALEETQRLLQQFPLDLEKFLAWITEAETTANVLQDASRKEKLLEDSRGV
RELMKPWQDLQGEIEAHTDIYHNLDENGQKILRSLEGSDEAPLLQRRLDNMNFKWSELRK
KSLNIRSHLEVSSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAF
KRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEV
NTEWDKLNLHSADWQRKIDEALERLQELQEAADELDLKLRQAEVIKGSWQPVGDLLIDSL
QDHLEKVKALRGEIAPLKENVNHVNDLAHHLTTLGIQLSPYNLSILEDLNTRWRLLQVAV
EDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTEL
YQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQII
NCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL
EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN
NKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKH
FNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPR
MGYLPVQTVLEGDNMETPVTLINFWPVDSAPASSPQLSHDDTHSRIEHYASRLAEMENSN
GSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILA
DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR
LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV
VGSQTSESMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGRNAPGKPMREDTM
Download sequence
Identical sequences ENSRNOP00000029969 10116.ENSRNOP00000063713

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.