SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 101510.RHA1_ro06243 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  101510.RHA1_ro06243
Domain Number 1 Region: 2-22,104-351
Classification Level Classification E-value
Superfamily beta-lactamase/transpeptidase-like 9.56e-57
Family beta-Lactamase/D-ala carboxypeptidase 0.00022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 101510.RHA1_ro06243
Sequence length 431
Comment (Rhodococcus jostii RHA1)
Sequence
MMWRRVCTAVVSGTLLAGLSVSAAGAIPPAAPSSPTSTPFATPNTDNCPNRSAPAPAIDL
SEVPQPGDPAPSAVSVPDEPVGGPKLAECGVILPDDAPALPADIAASGWVVADIDTGDVL
AAKDPHGRYRPASTIKMLLALVALSELDLDKTVTATAEDAAVEGSAVGIGKNGQYTNRQL
MQGLVMASGNDAAHLLARQLGGDAATVDKMNHLADTLGAHDTRTATPSGLDGPGMSSSPF
DLALIFHTAMKNPTFAELISTETVQFPGFPKDPAIPDDQDRPPFALANDNQLLYNYDGAL
GGKTGFTDDARHTYVGGADHDGRRLMVTLMGAEAQPIRPWEQAARLLDYGFALDRDAQVG
SLEDLYPTESDSAAVLAAPPQQDSAAATSSVVASGSDHPHNTLALRAGVGIVGTAVVLML
VLGARRLSRRR
Download sequence
Identical sequences Q0S366
gi|111023206|ref|YP_706178.1| 101510.RHA1_ro06243

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]