SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 10228.JGI25032 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  10228.JGI25032
Domain Number 1 Region: 97-282
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 8.08e-18
Family Clostridium neurotoxins, the second last domain 0.037
Further Details:      
 
Weak hits

Sequence:  10228.JGI25032
Domain Number - Region: 19-96,382-462
Classification Level Classification E-value
Superfamily ARM repeat 0.00699
Family HspBP1 domain 0.066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 10228.JGI25032
Sequence length 551
Comment (Trichoplax adhaerens)
Sequence
ATLWSTLTAILKNNIHNLQLCSRNNLIKQAIYRLRDANRHVEDAILELIVVLARHSISVK
ELKSLMAALKGENSTWPKYSVKLLAAMRQIINRDQTDASVFFNFSGRRGGTIALPPIRKW
PTQTGFSIVTWFRLDPLVNSGSTKDLSPYLYCFQNGKGIGYSAYFVESNLMIETITKPKR
KGYSHVVNHKFRSRKWYMVGIVYIYNRFRRSELHCYVNGQEVSHDDVSIVSCDEPFHKCF
IGSCPQALPSTVFSGQMGSFYTFIEALSNDTMAAIYYLGPDYRCQFKHGFETDVPLSASQ
EKLLYDGRLSTAIMFTYNPKACDQKLCLESSPTDNATYFVHSPHAIMLEGVYPVITNSFQ
SALRSLGGIQIIFPLFDQLDYNVYNASKENDNNDSVPSDDIGSMLLSLLCDLLRGSTTCQ
QQIVQGNGFLVLSRLIEKVSPASLEDSTLDTLLMLGKYLFSSPGKANLLNQWIDHILLKA
SLWIHTSAKVQVKLFSMLATEFVAMPEQLSLHMIDFKRIIGVPRLMHILKFYYWCKTTES
FNAKELSGQIN
Download sequence
Identical sequences B3RWG9
10228.JGI25032 jgi|Triad1|25032|e_gw1.5.910.1 XP_002112581.1.101920

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]