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Domain assignment for 10228.JGI52268 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  10228.JGI52268
Domain Number 1 Region: 413-477
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.00000000000171
Family Cold shock DNA-binding domain-like 0.0054
Further Details:      
 
Domain Number 2 Region: 573-641
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.0000000000362
Family Cold shock DNA-binding domain-like 0.0045
Further Details:      
 
Domain Number 3 Region: 116-174
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.0000269
Family Cold shock DNA-binding domain-like 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 10228.JGI52268
Sequence length 693
Comment (Trichoplax adhaerens)
Sequence
MATLKFATSIWHLSMRARRMYNISNSASLNCLSMNYPDRRYDGRNKSRGPVYRNQREFNN
NTGRGRNYYSNDKPRNRGYPPRNAANGYVNSYNDNSNANKQANSAPNPTTDMKMFMSKLS
HSNGKIVTMTHMYGYISAVHGELLFFPYDQYNGNINKVQVGDKVSFDIKYESDRPYGISN
CRIAYNIQLLPKMMEQNGDRTDELANVNDSSDYETIINEKPLDGSIIATSEKLTDQATDL
ENSAFAIKYIDNNGQENTITLELNTETRQSLRIGDKVQFDIATDKKNGQKHPINLLICNA
NNLSSNESNNKDMQLSVLNQVEFTMMTDPNTNKSNAMEVRILPHNTFEYADIDTIIHDGL
IEKSCLSALTFRNGKDTDVGLLSYYDKQGIIQILRYFPKDIYLSKSVPEFGDKGFVATLK
DNYGFLEDYNHCREIYFHYSSVKTPLQYLNIGTEVEFSLEVRNDKVCAENVIQLPTGTLA
KEVISPEVLNGTVERALLVPEKQGIVFEGIIKLGDQSEKSVDSGQTTTNNYSFLSSSMIT
SKVVLQDNEKVKFQLATNPQTGKVRAVNVEPVRQVMVGRIESMKGDYGFIEYHEGEFKNF
FFHMNDVSRADATFKVGDTVQFVIQQQRNGKTHAIQIRTISSKGEYKGNTFSGSLISNER
NNVSIIRQPKGPDGTRGFQYKRLSSNTSAQEST
Download sequence
Identical sequences B3RM82
XP_002108854.1.101920 jgi|Triad1|52268|fgeneshTA2_pg.C_scaffold_1001015 10228.JGI52268

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