SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 10228.JGI53368 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  10228.JGI53368
Domain Number 1 Region: 405-603
Classification Level Classification E-value
Superfamily Kelch motif 4.9e-56
Family Kelch motif 0.0000326
Further Details:      
 
Domain Number 2 Region: 40-157
Classification Level Classification E-value
Superfamily POZ domain 1.71e-31
Family BTB/POZ domain 0.00075
Further Details:      
 
Domain Number 3 Region: 322-398
Classification Level Classification E-value
Superfamily Galactose oxidase, central domain 0.0000000000000654
Family Galactose oxidase, central domain 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 10228.JGI53368
Sequence length 606
Comment (Trichoplax adhaerens)
Sequence
MNSSSQNLNLPFALNERPRGGSRSSSTASADISSNGIKHRSRKHAAKVLHYFNKLRRKGQ
LCDVTLVVESKRFYCHRGILAACSPYFRAVFNENSSINPEEEICIQDADEESVEAILDYM
YTANIIINENNAHILFPIASLMQLDEILDTCSQFLRDQLTLSNCLSVRTYADDHSSQDLY
QTATAYIQENFTEIVLQTEFLALSITQLVAILRSGNLNVPNEEFIYQAIIDWARYDIKQR
RDQLHQALQHVRLSSLNPRYLVTVVSQEPLIRCDEKCRDLVDQAKNILLLPEAIANRANT
TTVRIHQSKQPPVTNMNGASTTMIYVVGGWSHGKADNTVEVCHACYGNWKVVSKMNKPRY
GVGVAVLEDSIFAIGGHDGKNYLDTVEQFNPKTKYWSLDIATTRTCHTSHGVATVNNCIY
AIGGQDGVSSLNLVERYDPHHNEWYSVVPMKSRRLGLATAVVNNCIYAAGGFDGTAILST
VERLDPRENQWVAISPMNKRRKHHGATVINGILHVAGGRDDSKELKTVEYYDSRNNTWIP
TTSMTTLRSGMILTAFNDQLAVIGGFDGVDYLKSVEILDRELEEWKYCSGMNHSRLGAGV
AVLESP
Download sequence
Identical sequences B3RP16
10228.JGI53368 XP_002109389.1.101920 jgi|Triad1|53368|fgeneshTA2_pg.C_scaffold_2000525

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]