SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 10228.JGI56813 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  10228.JGI56813
Domain Number 1 Region: 193-259
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.000000956
Family Ras-binding domain, RBD 0.05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 10228.JGI56813
Sequence length 336
Comment (Trichoplax adhaerens)
Sequence
MGEGLVKDWLVVEKNNCNYNQCDHSIAATDEILIMSRQQVRLVKVISLDQNNYRISENSL
TGSQPETSTNQANRAVNKAKGKRTPTKQEILARLSLYNKYHEKGSPHYKLTYIQDANGIL
ISGNLRVHWGLKRPIKQALSSTQSLYGSSSQSPLPTRKLAKNQVSDAVSRPISLMDEDLE
STFTPQFDSAAAVNATSRTTTPFVIKNLFHKFRIINNPKEFALFIKRPKTGDCRRLSDVE
CPLLARLMLGPNEETFRIFVCEVNDPKPAVNPQQQAIVLSPEAAQYINFSLTELSNIIEM
YKIEEEKEKLKIKEKCYFFVFFFIARLGVASRSGHD
Download sequence
Identical sequences B3RWM8
XP_002112614.1.101920 jgi|Triad1|56813|fgeneshTA2_pg.C_scaffold_5000707 10228.JGI56813

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]