SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 10228.JGI57374 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  10228.JGI57374
Domain Number 1 Region: 15-63
Classification Level Classification E-value
Superfamily HIT/MYND zinc finger-like 0.00000000000117
Family MYND zinc finger 0.022
Further Details:      
 
Domain Number 2 Region: 131-246
Classification Level Classification E-value
Superfamily TPR-like 0.0000000441
Family Tetratricopeptide repeat (TPR) 0.046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 10228.JGI57374
Sequence length 368
Comment (Trichoplax adhaerens)
Sequence
MATTTTINPLANPKGTKKLCELCQKPAYIQCPNCRVTYYCDREHQKLDWDGIHAETCQLL
IPLRTPLPFSSSADERAHRERQQLNRQRQIIELARTHGQKLLFESKYDLVVPAAMLCLKF
SIGLYGLNSIELVPSYLLLGEASIGLGRLKQGEDYLSQAQWTVLKTPECPNQIKSKLYRN
LGLLHAAKKNHSEALLQLADDIYHSSLVYGTDHIHTSGGYFHMANIFLKEGSPEKTLTLY
DRVVTVWFAHLSLLIKEHEKTANLEDPAAIVAGQDELSLDVAQEAEAKLVLNTIQTVVQE
KILHKEDHELTIKVHAALAMLHYILNETSKVIEMLDVIKKVVDRPSNINSKLVESYQQFR
LIVEKHLS
Download sequence
Identical sequences B3RZ96
jgi|Triad1|57374|fgeneshTA2_pg.C_scaffold_6000354 10228.JGI57374 XP_002113691.1.101920

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]