SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 10228.JGI59264 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  10228.JGI59264
Domain Number 1 Region: 19-345
Classification Level Classification E-value
Superfamily ARM repeat 5.76e-21
Family Armadillo repeat 0.049
Further Details:      
 
Domain Number 2 Region: 746-815,849-878
Classification Level Classification E-value
Superfamily POZ domain 0.00000000118
Family BTB/POZ domain 0.037
Further Details:      
 
Domain Number 3 Region: 444-518,596-712
Classification Level Classification E-value
Superfamily ARM repeat 0.0000192
Family PBS lyase HEAT-like repeat 0.063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 10228.JGI59264
Sequence length 952
Comment (Trichoplax adhaerens)
Sequence
MAKNLKRILAYTKCTNDVQTIYNRGGITVLLDTLYQSSEKNLNVVQFALIVIGNCLKYKR
DLPQAYTKADLVWEELCEFLVKTLKAAEDSNYISTHCLRILDKLAREECMREYIYKLVDG
FQLLLQRLTLDTLRYEENVYILDIMVKLLHQKNSSVTFVSQNGLLRLTKLMRSTDEVDLF
RRCADIVLSLAKRRDRQCYFQRLKDDGCFKTLVTVGMDKKKSSNIRKKTVNLLFNLCEIK
PYSRFLVLADIHTLLIRLIETAPMGHTKSCAVRSLSLLCCDVANRSTLNKCGAIEMLISL
LKDNNVKKLHHVIVDGLHWFLYDQEALQVMVKEYDLVSALSGHLNRLIDGLANCVRHTNS
TDDNYCYDNTIGVEREQSQSCVNPVLSSSPLINSMDNCEWNGSLSPVSLMSISCSSESSS
IYLNDSKINENNSISDMKNSDRLCIATILNLLKAISRLAHSYHINVVKFCMKGLLGCIVK
DSENRADAYKVMSLIMENKCCLKVMLRRCVPWLIYQYLMNDHETNVSSGNFTYFATHYLH
DESLKEHWNTLTNDEEVTTSATDQLSSLKDSVNLTSSFITAVTDTLQADDYIATTSSSPK
EMAVSLLQLIGKISSSDYGKGEIKNILSTGNTSWKRACAFSLPYLLSYERSMYKVLLRNN
GISTILEPLLLENVDDFTTTITCHCISSLVERFQSCKQVYRRKRARSNDGTQHFTKKVQK
LEMSQDSSQSYFFIDDSRYTYYQQQSFMTADAILVTENGSELPVNREIISQQSVYFSAMY
SGYFIEAKLEKSYIKEIDDTAMIAILLYLYGFNWRIQPSIMQLKTILSANSINEVKFTVK
LFDRLDEEDNIEFYWNVLISADKLLLEELKEACEPYIIDLLKPHNRSETLFLSCVYSCEG
VFMYCIDQFFRYWTSAEQCNCFKQFPEPYKEDFIKRVCNFVNKIFFCCVDNI
Download sequence
Identical sequences B3S5B2
10228.JGI59264 jgi|Triad1|59264|fgeneshTA2_pg.C_scaffold_10000107 XP_002115262.1.101920

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]