SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 10228.JGI59787 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  10228.JGI59787
Domain Number 1 Region: 314-394
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 7.89e-18
Family PCI domain (PINT motif) 0.029
Further Details:      
 
Domain Number 2 Region: 109-328
Classification Level Classification E-value
Superfamily TPR-like 0.00000948
Family Tetratricopeptide repeat (TPR) 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 10228.JGI59787
Sequence length 421
Comment (Trichoplax adhaerens)
Sequence
MVMEVNSEWDEIEKELTLDPDKAIKTLSEIVQRDIRVGDENGIKLKEKSVLALGSLLAKR
KQSQGLADLITATRPFLSVVSKAKAARLVKELVDLFLSIKASTTAEIQLCLDCIEWAKNE
KRSYLRQALESRLIGLYYENSNYVESLSLSSKLLKELKKLDDKELLVEVQLIESKVYHAV
KNIPKARAALTAARTTANTIYCPPKLQASLDLQSGILHAEEKDFKTSFSYFYEAFEGYDS
IDDSTAKLALKYMLLCKIMVNSPDDVKSIISGKLALRYAGVELEAMKSIATAGHNRSLSE
LEEATKKYKQELTEDPIIQSHLDALYDNLLEQNLLRIIEPYSRVEVEHVASIIKLSLNVV
ERKLSQMILDKKFYGIMDQSCGVLTIYEEPQVDQSFEAALETISNMGKVVDALYEKAKKL
L
Download sequence
Identical sequences B3S6F5
10228.JGI59787 jgi|Triad1|59787|fgeneshTA2_pg.C_scaffold_12000138 XP_002115898.1.101920

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]