SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 104341.JGI111840 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  104341.JGI111840
Domain Number 1 Region: 32-63,114-246
Classification Level Classification E-value
Superfamily TPR-like 0.000038
Family Tetratricopeptide repeat (TPR) 0.036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI111840
Sequence length 276
Comment (Postia placenta MAD 698)
Sequence
MDSSELYHVKQQFILGAYKSLADLALPDPTSPDYNPTLLYKCRAYIALDKPRDALELVPD
DTDDVSLKAVSALARYVGAADAATKDASLEELRDLCVEIEGDDIEADEKQKGVVRVLAGT
AFAVAGEVEEALETLGVGANVDNLEAVAICVQIYLSISRPDLARKEFERAKRWAEDDVLV
QLIEASIGLVTGRDGYADCNSFYTEQLGNPSLSSPHLLTARGVTRLLRGEVPAAQSDFEE
AVAQQGGAADAETLAAMAVTAGLGAAKPAEAEQLWR
Download sequence
Identical sequences 104341.JGI111840 jgi|Pospl1|111840|estExt_Genewise1Plus.C_50173

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]