SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 104341.JGI59862 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  104341.JGI59862
Domain Number 1 Region: 45-171,217-307
Classification Level Classification E-value
Superfamily t-snare proteins 2.2e-41
Family t-snare proteins 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI59862
Sequence length 343
Comment (Postia placenta MAD 698)
Sequence
MPVQDRTNEFRACVESIRNRSSIPRKGDESRQRLLQSQGKVPGSKSEFSRMASAIAKDIS
NTTIKLGKLAQLAKRKTLFDDRPVEISELTYIIKQDIANINKQIAALQSYVKQQNATNAQ
SAEGKQLEEHNHNVVMLLQSKLADTSMSFKDVLEIRTQNMKESKDRTDQFMHSTSAAVSQ
APTNSLLFGNAQRQDPMGDGTVVSPRFDPKGKGRATPRPGGDDILALDLGAAEEGSANGD
AFMQMQLVEQQDNYIQSRSTAIESIESTIAELGQIFTQLAQMVAEQRETVQRIDADTVDI
AANVSGAQRELLKYYASISGNRWLMLKVFGVLIVFFLIFILVS
Download sequence
Identical sequences jgi|Pospl1|59862|e_gw1.732.5.1 104341.JGI59862

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]