SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 104341.JGI96250 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  104341.JGI96250
Domain Number 1 Region: 155-264
Classification Level Classification E-value
Superfamily Lysozyme-like 5.63e-23
Family Bacterial muramidase, catalytic domain 0.0083
Further Details:      
 
Domain Number 2 Region: 350-452
Classification Level Classification E-value
Superfamily POZ domain 0.00000706
Family BTB/POZ domain 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI96250
Sequence length 641
Comment (Postia placenta MAD 698)
Sequence
MHLVAPFFLLALAIECVCAGHAHLDDTRAHRQSQHSRLARRANGRCGAQRQAKVRLRTAE
PPVRLPDSAQTEQNLNDASIPSFVLNVTSNVINVQSACGPTGATPNVTPISGPNGNIDWL
NCGVGDGGWRPPFVTANDIIAKDLDAALLEPGSPFTACSAYVATFKKYATKYGVPPILIA
AIAMQESTCNANTVGGAGEQGLMQLTQDKCGSAPNGNCKDVDYNIKTGTKYFSTVLKNNN
GNVLLTLGNYNGWPAGMTYYFRVRPLHRPKGPAVDVRTTSTTNAATGSANKKKERDPPTT
QAGTVVARAREGAHGPAAVCGAEEGANLPRLLEQRENMDNAQRVDDLWYDDGSVVLIAQN
RAFRVHRSILSQQSSVFRDMFAIPQSSDVMNMDGCPIVELADDACMLEHLLRAICNRSFF
LPCATESTNEVVRIGTSIASLSHKYDIPPLMTEAIVRLEDIYSTKFEDHNRYHVDEDPMD
DGTAIFVINVIRRIAPSPLDRILPVAFYYCRRTSQLPMSPLVYGIRRGPCSPPEKLSDED
LARVLHGKSELELNMTLAFTKVFLPLNANFGLRCSDSLSCRDGLNQLMRCVMTSIPTAQI
LADCPDNFYTGLCAVCREHVKRALSSSRRKLWGNLKALFAL
Download sequence
Identical sequences B8PJI0
jgi|Pospl1|96250|fgenesh3_pg.175__4 XP_002475841.1.31404 104341.JGI96250

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]