SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 104341.JGI99747 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  104341.JGI99747
Domain Number 1 Region: 135-167
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000082
Family Retrovirus zinc finger-like domains 0.0037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI99747
Sequence length 517
Comment (Postia placenta MAD 698)
Sequence
MKLPERQKNKKTVLSLGNYVTRFEQLASKAQLKDAEVNGVNRTENDYHTLHANFVKGLPK
ELYVSLATRVARDRPNTMKAWYDEVRNADAAEQGALTVTDTRDYGEPMDIDAAAVVATFA
STSGGRKWELGAVLNEANRKLHRDGNLCFYCHIKGHSAKDCRKKAAARQGGGRPNQGGSG
KDDFRARIKTLSADEKRELRYIPTRTNMSSTLSFLDQFNAPSTEGGKRLSIYTPKHTHVG
DSTLLTLLLSNPTDIFNKLKAHNPEATNATDRAALEAYLSACREYDEAVKAADEAINHHK
RLLRQQDDRVLTELIRLDNLKVAHRFQPLLPRSIRARHNKFIPRAIPNAYLPLPAPLPTS
AFRRPPIPSPFLQATLRSTTIPADWQPNPGWTPKGSCRRCGSSRHWEIINEAKERKEKER
QTKAVPIPPPRSTNPEPPTSPIAGPSRPRPDTPVVFRKVDPDWTPDTTQWTWDSSWPHQK
HLSGEEWMNVGRNARKEWFDEEEDDGVDWELYGDGEQ
Download sequence
Identical sequences B8P9L6
104341.JGI99747 XP_002472381.1.31404 jgi|Pospl1|99747|fgenesh3_pg.55__45

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]