SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 114615.BRADO2041 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  114615.BRADO2041
Domain Number 1 Region: 278-555
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 5.23e-62
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.0000311
Further Details:      
 
Domain Number 2 Region: 218-262
Classification Level Classification E-value
Superfamily HAMP domain-like 0.0000327
Family HAMP domain 0.0046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 114615.BRADO2041
Sequence length 562
Comment (Bradyrhizobium ORS278)
Sequence
MSRMSIRKKIISVIAFMLVTLCGLGALAVTSMQSINANTVDIATNWLPSVRAIGELRADI
NLLRIALRAHVMAETAEAKQAGEKRVNSILETINKDRKTYEPMITSAEERAIYNNWVQAW
EKYVVAIKQVIDESNKSVGRLPREATELLEKSAAAIARDADKYFVQDIEFNNKGADDATR
QAAESFSRAIWLVLSIIVAAVIAGVAVGYYLVQNVSSGIASIIKPMQELAKGDLGAEVTH
RGEPTEIGAMADTLQVFKEALIAKKEADERAAADAEAKIERGRRVDNITRQFEATIGEIV
QTVSSASTELEHSAGALSSTATRSQEISTAVAAASEEASTNVQSVASATEELSSSITEIS
RQVQESARMATEAVDQARMTNDRVSELSKAAARIGDVVELINTIAGQTNLLALNATIEAA
RAGEAGRGFAVVASEVKALAEQTAKATDEIGQQVSGIQAATQESVGAIRAISTTIEKLSE
ISSAIAAAVEEQGAATQEISRNVQQASQGTQEVSSNVVDVQRGASETGQASAHVLSAAQS
LASDSDRLKREVASFLQSVRAA
Download sequence
Identical sequences A4YPS2
gi|146339087|ref|YP_001204135.1| WP_011925119.1.46373 114615.BRADO2041

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]