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Domain assignment for 114615.BRADO4657 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  114615.BRADO4657
Domain Number 1 Region: 293-494
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 1.01e-44
Family Multidrug efflux transporter AcrB transmembrane domain 0.0000265
Further Details:      
 
Domain Number 2 Region: 821-1017
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 9.81e-42
Family Multidrug efflux transporter AcrB transmembrane domain 0.00014
Further Details:      
 
Domain Number 3 Region: 43-136
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 3.31e-23
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0018
Further Details:      
 
Domain Number 4 Region: 140-185,271-327
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 4.55e-20
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0074
Further Details:      
 
Domain Number 5 Region: 186-269
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.00000000000000275
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.0047
Further Details:      
 
Domain Number 6 Region: 710-792
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.0000000000000628
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.0066
Further Details:      
 
Domain Number 7 Region: 559-656
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.000000000000575
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0083
Further Details:      
 
Domain Number 8 Region: 667-707,796-839
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.00000000000471
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 114615.BRADO4657
Sequence length 1048
Comment (Bradyrhizobium ORS278)
Sequence
MNGGGISAPFIKYPIGTSLLMAGILFIGLVAYPLLPVAPLPQVDFPTIQVTANLPGGSPE
TMATSVAQPLERQFAQIPGIAQMTSTSYLGTASVTIQFDLNRSIDGAANDVQGAINAASG
QLPKSLPSPPTYRKVNPADSPILLLSATSETLPLTTVSDAVDAGLAQQISQISGVAQVII
GGQQKPSIRVQIDPAKLVAKGLSMEDVRSQIAITTVDSPKGNIDGERRAYTIYANDQLTD
SKDWNDVIIAYRNGGPLRIRDIGKAVTGAEDAKQAAWANGKRGVFLVIFKQPGANVIETV
DRIKGLLPRLVAAIPPAIKIDVISDRTTTIRAAVEDVQFTLILTIFLVVMVIFIFLRSFW
ATVIPTITVPLALLGACAMMWGVGYTLDNLSLMALTIAVGFVVDDAIVMLENISRYVEEG
ETPMAAAYKGAKEIGFTIVSISISLVAVLIPLLLMGGIIGRLFREFAVVLAMTIFVSMFV
SLTLTPMMASRFLRNEHAAQHGKFYQWSEAAFDAMLRAYEKGLDLALRWRFVTLMVFFAT
LGLSVYLFILIPKGFFPQQDVGLITATSEASQDISFKAMQSRQEALAKIVMADHDVASVA
MAIGGSGRAGNNGNMFITLKPREERDATAQQIIARLRPQLEKVEGARLYMQAAQDIRLGG
RPSRTQFEFTLQDPNLSELNEWAPKILDKMRSLPELRDVATDQQADGTTVQLAINRDTAS
RYGITPQLIDDTLYDAFGQRQVAQYFTQLNSYRVILEILPELQGNLDTLNKLYVKSPTTG
DQVPLSTFANWTTAPVKPLSISHQGQFPSITISFNLAQGVALGQATDAVQRAMVELGAPA
TLNSSFQGTAQAFQQSLSTVPLLILAALVVVYLILGILYESYIHPITILSTLPSAGVGAL
AILMAFGYEFSLIALIGVILLIGIVKKNGIMMVDFAIAAERDQHLPPEQSIRQAALLRFR
PIMMTTMAALLGGVPLMLGNGTGSEIRQPLGYAMVGGLIVSQMLTLFTTPVIYLYLDKVN
NAFARWGRTHIDHETEKAPTGSVKEAAE
Download sequence
Identical sequences A4YWW3
WP_011927492.1.46373 114615.BRADO4657 gi|146341559|ref|YP_001206607.1|

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