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  Home > Genomes > STRING v9.0.5 > 121224.XP_002427847

Domain assignment for 121224.XP_002427847 from STRING v9.0.5

Domain architecture

Domain assignment details

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Strong hits

Sequence:  121224.XP_002427847
Domain Number 1 Region: 2703-2821
Classification Level Classification E-value
Superfamily Cadherin-like 5.57e-31
Family Cadherin 0.00059
Further Details:      
 
Domain Number 2 Region: 1323-1436
Classification Level Classification E-value
Superfamily Cadherin-like 3.71e-30
Family Cadherin 0.0009
Further Details:      
 
Domain Number 3 Region: 2283-2396
Classification Level Classification E-value
Superfamily Cadherin-like 1.71e-29
Family Cadherin 0.0011
Further Details:      
 
Domain Number 4 Region: 4006-4224
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 7.32e-29
Family Laminin G-like module 0.011
Further Details:      
 
Domain Number 5 Region: 1860-1963
Classification Level Classification E-value
Superfamily Cadherin-like 3.14e-28
Family Cadherin 0.00042
Further Details:      
 
Domain Number 6 Region: 1960-2082
Classification Level Classification E-value
Superfamily Cadherin-like 4e-28
Family Cadherin 0.0007
Further Details:      
 
Domain Number 7 Region: 1223-1335
Classification Level Classification E-value
Superfamily Cadherin-like 1.71e-27
Family Cadherin 0.00065
Further Details:      
 
Domain Number 8 Region: 3447-3558
Classification Level Classification E-value
Superfamily Cadherin-like 2.71e-27
Family Cadherin 0.00071
Further Details:      
 
Domain Number 9 Region: 3235-3337
Classification Level Classification E-value
Superfamily Cadherin-like 2.86e-27
Family Cadherin 0.00068
Further Details:      
 
Domain Number 10 Region: 2174-2289
Classification Level Classification E-value
Superfamily Cadherin-like 3.43e-27
Family Cadherin 0.00047
Further Details:      
 
Domain Number 11 Region: 1004-1114
Classification Level Classification E-value
Superfamily Cadherin-like 7.14e-27
Family Cadherin 0.0014
Further Details:      
 
Domain Number 12 Region: 481-585
Classification Level Classification E-value
Superfamily Cadherin-like 9.14e-27
Family Cadherin 0.0013
Further Details:      
 
Domain Number 13 Region: 3135-3235
Classification Level Classification E-value
Superfamily Cadherin-like 1.57e-26
Family Cadherin 0.0011
Further Details:      
 
Domain Number 14 Region: 587-694
Classification Level Classification E-value
Superfamily Cadherin-like 2e-26
Family Cadherin 0.0013
Further Details:      
 
Domain Number 15 Region: 2907-3037
Classification Level Classification E-value
Superfamily Cadherin-like 2e-26
Family Cadherin 0.0012
Further Details:      
 
Domain Number 16 Region: 1434-1545
Classification Level Classification E-value
Superfamily Cadherin-like 8.42e-25
Family Cadherin 0.00088
Further Details:      
 
Domain Number 17 Region: 2389-2493
Classification Level Classification E-value
Superfamily Cadherin-like 3e-24
Family Cadherin 0.0013
Further Details:      
 
Domain Number 18 Region: 140-253
Classification Level Classification E-value
Superfamily Cadherin-like 2.28e-23
Family Cadherin 0.0016
Further Details:      
 
Domain Number 19 Region: 2813-2919
Classification Level Classification E-value
Superfamily Cadherin-like 2.71e-23
Family Cadherin 0.001
Further Details:      
 
Domain Number 20 Region: 3551-3656
Classification Level Classification E-value
Superfamily Cadherin-like 2.71e-23
Family Cadherin 0.0015
Further Details:      
 
Domain Number 21 Region: 248-382
Classification Level Classification E-value
Superfamily Cadherin-like 8.57e-23
Family Cadherin 0.0012
Further Details:      
 
Domain Number 22 Region: 4250-4297,4337-4482
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 9.96e-23
Family Laminin G-like module 0.0046
Further Details:      
 
Domain Number 23 Region: 1760-1858
Classification Level Classification E-value
Superfamily Cadherin-like 3.71e-22
Family Cadherin 0.0019
Further Details:      
 
Domain Number 24 Region: 690-797
Classification Level Classification E-value
Superfamily Cadherin-like 8.28e-22
Family Cadherin 0.0011
Further Details:      
 
Domain Number 25 Region: 2071-2172
Classification Level Classification E-value
Superfamily Cadherin-like 1.34e-21
Family Cadherin 0.0013
Further Details:      
 
Domain Number 26 Region: 3339-3445
Classification Level Classification E-value
Superfamily Cadherin-like 1.37e-21
Family Cadherin 0.001
Further Details:      
 
Domain Number 27 Region: 384-481
Classification Level Classification E-value
Superfamily Cadherin-like 1.17e-20
Family Cadherin 0.0016
Further Details:      
 
Domain Number 28 Region: 900-1008
Classification Level Classification E-value
Superfamily Cadherin-like 3.57e-20
Family Cadherin 0.0031
Further Details:      
 
Domain Number 29 Region: 3024-3127
Classification Level Classification E-value
Superfamily Cadherin-like 5e-20
Family Cadherin 0.0012
Further Details:      
 
Domain Number 30 Region: 1114-1229
Classification Level Classification E-value
Superfamily Cadherin-like 1.36e-19
Family Cadherin 0.0019
Further Details:      
 
Domain Number 31 Region: 2489-2602
Classification Level Classification E-value
Superfamily Cadherin-like 6.42e-19
Family Cadherin 0.002
Further Details:      
 
Domain Number 32 Region: 1541-1643
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000000528
Family Cadherin 0.002
Further Details:      
 
Domain Number 33 Region: 810-912
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000000000116
Family Cadherin 0.0051
Further Details:      
 
Domain Number 34 Region: 2611-2715
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000157
Family Cadherin 0.0036
Further Details:      
 
Domain Number 35 Region: 1653-1758
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000003
Family Cadherin 0.0024
Further Details:      
 
Domain Number 36 Region: 80-147
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000257
Family Cadherin 0.0085
Further Details:      
 
Domain Number 37 Region: 3951-3988
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000129
Family EGF-type module 0.011
Further Details:      
 
Domain Number 38 Region: 3911-3950
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000267
Family EGF-type module 0.012
Further Details:      
 
Weak hits

Sequence:  121224.XP_002427847
Domain Number - Region: 3891-3914
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00383
Family EGF-type module 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 121224.XP_002427847
Sequence length 5078
Comment (Pediculus humanus corporis)
Sequence 
MLWVKKLAFLLSCQCLLIAAQGPGPGPGYKKSSQTPYSVLSGNSLAPAPMQSRAVDTRIS
FEIAEGLPSGTIVGTIPIKENFTYRFNEPPAEFSLDANTGVIRTTMVLDRESFRSDRFDL
VVLSSQPTYPIEVRIVVTDMNDNAPEFPEPSITVMFSESSAPGTRLLLDSAFDKDAGQNG
ELDYNIVGGNKDQKFRINITSNPSGEMSYLNLETTGNLDRETRAFYHLNISAKDGGDPPL
YGYLQVNVTILDVNDNPPMFDHSDYNVSLNESVPPGTSVLQVRATDNDAGDNAKITYNLE
DIGHQFSIDPETGVISTVEPLKCVRQQNCSEYSISLGSCPKSCVISVSAWDHGVPRQVGR
AYVTVNLIEVNTNDHDPIINFTYFLRPAKFATVDENAMNGTVVAAVTVVDEDEGLNGETT
VVIKAGNELNHFRLDSTPAVRVNGVLDREEISKYNLTIVATDKGTPPRSSSASLIILVND
VNDHEPVFEKSEYSVVLSELSPPGTYVAGITASDEDTGVNAQIYYAFVSGNDNNWFELNA
DSGLITTKTTIDREIQGSVELKISARDGGPSPKWAYTQLKVTVLDENDESPKFSQDQINV
TLLEDTPPNTLVAILTASDSDQGTNGSVAYFLDAEFSPKYSGPFALDSLTGQLTTKSYLD
REITPYYEIKVIAKDQGVPPRSSTAVVNLFVEDVNDNSPEFYPLKYFTIVSENIATGNKV
LQVFAHDLDEGKNSELKYSIESGHDDLFNINPKTGEIHVLSSLKQTPKGLFELVISVKDA
GGRKCSENAIVEIMKENHLISLEFNMLAGYEFKIVEDEGDKIGSEIGKIEIRERDGGHDI
KKENIRYYITDGDSTGNFFLNEETGVLTRIKVIDREEKQFYNLVCIARANLAYGKTWVNI
TVTDVNDNRPMFSREKDFVEVNENSPVGLEVYHSIAKDLDSGPNSRFKFNLTKNAQERFR
INEATGVIYLNRKINDDPGTLIPIEVTVTDFGKPPLMSKQTVVISIKDVNDHTPVFDHTS
YETSLLESTRVNKRFFRLVASDADLGLNGLVSYEISEGNFEGKFGIFPDGYLYVKSSLDR
EERDYYSLIVTARDSGEPSRSSTVSVVIHVIDENDNPPEFTNSTFTFHVLENEPPDSFVG
KLSATDRDIGRNAELIFSFANPQNEFIIDPKNGFVKTLIVFDREALIQTTGKGFISLEAV
VHDNGQIKLKDKAAVNVFIDDLNDNPPVFLTTPYKVQISEGSTLETQVLRVYATDIDEGV
NGEVYYSIAMGNEEQKFSIEQGTGQITLIKDLDRETTSRYVLTVIAEDGAVQNKLSVSTT
VVIDILDENDNAPEFVQTMFEISVPETTPVNTKLTQFKAIDMDIGINSEISFSIGAGNRR
DTFHIDPTSGTLYLHKLLDYEELNSYTLTIVASDGGNPRLSSTTLFNVTVEDSNDNSPVF
PNTALVRQILEGIPVNKAIVTVTAEDPDSGKNGEVMYSISSQEPETPGHERHFGINPKTG
VIYTLLPIDREAVDTFLLTVVATDQACPESSRRSAEKLVTVIVEDINDNAPIFASMNAAV
LPHQMTREGTLIMNVFARDLDSNTNGLVKYDLISGNAELFKLDINSGALTLRQSLVDPKP
IYHLAVKATDEAVQSERKSTEAYITLFLKGDGENEPKFLQENIQGSVYENESPGKSILTI
SAKLQGVDLEYFVTNVTGNGKQADCLFDVDAKSGVLTNAVALDRETGSEFYIVEVYAVGV
NTSRPHTSLTKVRVNVLDKNDSPPSFKNTKLNYSVSEDLPVGHVIATINAVDPDTIGKIT
YNLVGGGGENKFEIESSSGILKLNDSLDRETKDSYQLQVRANDGIQYTDAIVKIFVTDTN
DNPPVFSDNAYSFDVPENTIRGTRVGEIMATDEDEGINGQVSYQVISDWANDVFSLNSQS
GVFTLTTRLDYEEVQHYIFVVQAQDSGKPSLSSTLTVYFNVIDLNDNAPLFDPMSYNNEV
FENVTIGTNVVTVSATDLDSGQNGAIEYKIISGDENEDLAIANNGTIYTVKELDRETKSA
YNLVVTGTDLAEPPQQRLSSTVQVTIVLKDVNDMSPEFITPTKTSVSENIPLNTVVLAIK
AIDKDEGRNSYLEYSLYDPTKTFSVGTIDGLLRVVGKLDRETVANYSLEVVAKDKGDPPR
YTKQNIFVNVVDENDNSPMFDPKHYSASIAENASIGASVLQVSATDVDEGLNGKVRYSIF
SGDENRDFSISEDTGVVRVAKNLNFERKPRYLLTVRAEDSSNNDDDNIRYDTATMSIIVR
DINDNPPVFLDSPYYAYVMENTVPSPDGYFLTVRASDADSPQYNGQVRYFLKEGDAGLFR
INASTGDLYLSRPLDREKQSEYLLTLVAMDTGTPPLSGSGTVRVIVQDVNDHSPVFERQS
YVASIMENSPIGYFVTQPVATDQDDGLNAKIKYSFFGDKADRFHLEENTGVITTATILDR
EETSIYFLTYVAQDCSITEPKATAVNLTIIILDDNDNSPEFSSAEYSVSVPDNTSGDEFI
FGAKAHDDDIGKNSQIKYFLDGKDKDKFTIAPDTGVIKAAGKLSTASIDGSDKVYNIEIH
AEDGGEEPRTASAKLNVKLEPQEWFPKIIAPKENKFVLPENIETGKVISKLSAVSSKSDS
YDRIRYGIAGGNLKEAIKINSDSGEISVIGGKLDFETSPIYEVWVEAHYVDNSALRTVLQ
ITINVTDTNDNPPVIEKQIYSANIYEEEYPPLKVCTIKATDLDSEQNGEISYRLINDSDG
TFSIDEKNGDIFTEVKLDRESIASYTLTVEAFDHGNPQLTSTATVLVNVLDKNDNPPRFT
RLFSVNVTENAEIGSFVIRVTSSDQDIGENANATYSFTENPGNKFSLDPLSGNVTVAGPL
DRETQDEYLLKVAAFDGAWRSETPLTITIQDQNDNAPEFEHFDYSFNFPESQSSVIFVGQ
VIATDRDKHGANSVISYSLKHPSDIFTIDPASGEIFSKRPLRYKYTALEHSPENQYTLTV
LATDNGKPPMSSECLVTVNIIDSNNNPPKFTKSQYFSSLPKSADYEQKILQVKATDEQDF
GMNAEIDYSISGGNGSNYFNINEKTGWLTVSRANIPVKVLSRYVINVKATDRGVPPLSDE
AQVTLVVTGENLYSPVFPALSFQVIIPENDPVGSTILTIKATDDDDGPNGMVEYKISSGN
EDSKFHLNSTTGALKILKPLDYDTVSNYHLNVTATDLGFEPHQATAMVTISLTDVNDNPP
TFNQSVYKAYIPENSPPKTFIFQVQAHDIDSPKNAIIHYSIIRGTGKDVFTIDSKTGTIF
SKSRLDYEEKDEYSLEILAANPDSPMFGSTKVIVYVTGVNEFYPKFVTPVFHFEISESSE
VGTSVGTIQATDEDAGDDGKVYYLFVGSSNDKGFSIGSETGTILVSRRLDRETQNRVVLT
VVAKNAGGIRGNDTDEAQVVISIQDGNDPPEFLQQEYETRVPEDVRPGKIITTVKAIDKD
VRPLNNQFSYSIINGNSEKAFKIDPQTGAIETAAELDREKIPAYTLIIGAIDTGVPPQTG
TATVKIILEDVNDNEPFFDPPNIIGYVTENEPPNTSVLTLTATDPDLPPNGAPFNYFLTG
GKDKDFVFVEKTTGVIKTRKVIDREVNPQLEIMISVEDNGVPKLKSQHSVSIIVLDQNDS
PSTPRTVQVLVHYFNDELPLGKIADVHPNDADTTGDYHCKIINNPGTKTNFFIKNGCELT
VGKFTPNVKYHFNVTGNDGKHSDVMSTVSVEFFPFTNTTVDNSFTIRLEEMTSGKFFTHY
YDTFVESIKSAFQSTDYVHLFSVNEVDSGLELTMAIKNSKGYYLKDNSIENIMKKRDSIQ
RKIGATAIIGYKPCQKFTCENSGTCNDGISVLDGSRIIDSQILIFSSPVVSHDYFCRCPD
GFTGKRCDRQHDPCLPNPCRAGGTCRRQGHDFQCLCPVSREGKLCEHEKENACDGNPCRN
GGSCRQSPDGSSFFCLCRPGYRGNHCETTSDSCRPNPCFNGGICVSLKPGYRCSCPKARH
GRHCEKSTFGFNELSYMTFSSLDVTTNDISIIFATVKPNALLIYNYGIQTGGRSDFVAVE
LINGKAVFSYGGARSAITSVMVPRDNATLANGAWHKITATRNGRVVSLSVATCNDNGDAC
QECKTGDATCYADDIGPTGTLNFNNHPMLVGGLTSTDPVLERPGQIHSDDLVGCVHSISI
NGRALNLSNPIKSQNVDPVCGRSHSPCAGSSQTNEVVEIINPCGEGQCLDRWQSHLCVCS
GLVAANCHDVLEPITLSDGSFVEFKISEKHSRMQLLDNLYHGSTLWKNENQKYKRYAEGN
LSSGSIGNSVSGPFKSLSVVFRTVKSEGLVLYSATNEDFTSIEIKNGKILYISRLGTSGS
FVNMTVTELLVNDGQWHNLTLHSHNRGLKLLLDGKKVGEELDSAGVHDFLDPYLTTLSIG
GTKKKTFAASDPAPIGFEGCIANFTVNNEIQSFNGSGSIFSETIIYGKIVKGCAGPIGVG
ANTAPDPLSIGVTLVIVFFVTLLVAILVSFIVFHLRRQKKEKGEVPGGRGSLGISKQNGS
TTLVAGGEGMVGTTGEGVLSRGVHGEANVGYLSETADALRSHHLMAPELISKKYKEKEII
SSDAQRHSRPDIIEREVVGKSPLLREEHPSISSAQVSQNSHHHDNSEIPEHYDLENASSI
APSDIDIVYHYKGYRDGGMRKYKATPPHIPSSGGYHHKHAASQQQHRHSPHLTAGFLPPS
RDSSRSAIPPPPVSRVDSSPNVVNNLTSQNTSKLLSHQSTPLARLSPSSELSSQQPRILT
LSDISGKPLQSALLATTSSSGGVGKDILHSNSERSLNSPVMSQISGQSSTTSRKNQQQNG
SNAGNKSAPLGLTAEEIDRLNCHPRTSSLVSTLDAVSSSSEPPITRQNHHLNNANDIPDN
NSSTTTDESGNDSFTCSEIEYDNNSISGDKRSDILFSKLTEDEDDRSRSNNSGNASKPPL
PPPSYDGFDSSFRGSLSTLVASDDDLSTHMGGLLYRAPNGSPSSTAPLGWNYLLNWGPNF
ESLVGVFKDIAELPDAVNGRVQTLRLPNQSPKPNEEYV
Download sequence
Identical sequences E0VP03
vb|PHUM348500-PA|EEB15109.1|protocadherin-16 XP_002427847.1.24195 121224.XP_002427847

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.