SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 121224.XP_002428055 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  121224.XP_002428055
Domain Number 1 Region: 119-148,216-306
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.00000118
Family WD40-repeat 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 121224.XP_002428055
Sequence length 1347
Comment (Pediculus humanus corporis)
Sequence
MVSNKMDNVTSGNPFRAHLESLEQAGRLVEKHIINDSAFPRLSQLMQISPKCSKTCSGLN
DYHYPSMDVLAPGISNLKQVTTVSKVPLPPEVMEHFGHMQCHCMMGLFPEIHRAWLTVDS
DIYIWSYEHGTDLAYFDGLSEVIVSVGIVKPKPDVFYQYIKHLLILTTTVEIVVLGVKFS
STKPDGPLGAYEEMYLLPEPIFVVPTDGVSIITINSSNNGRLFLGGRDGSLFEIEYKAER
NWFGKRFSKKNHSSRYLSYLVPSFISSIAYGEDNPIIQISIDNTRNILYTLSEKGSIEVW
DLGESGLEMSMVTSISQAHIVQAAVLIVKTLDAKCFRPVIHISALEIYDSKQLNLVAVTK
TGVRFYFATNTITQPEARPNRLVLRHVRMPPGFSANPSSYKPTNATKALYSRGSLVLITS
PGGEQDTLWCLSSDPYPYQSHLIEVQTILPLDGKVWSVAEVKNNTPFLAQKPCENLLNID
EDPPLVVRQHMEPPKKFVLLTAQGAQVITKLRPVDLLRQILIESKGPDSEAVQSYFQVQK
EEQACATCLILACLESQQNIQISEWATRAFFLYGSEPQVSRPIPKTSSSPVSPGVLYQYG
FNPGLASTPRTLSPGSPVQESTSVLFSAKHNGLYLYVSRILRPLWSESIVAKVVTPTKQQ
FLCSKVTSEECVWVLGYLHSVKSFLEKNSQFTTHTSAGLLSNVMKKNPLTPLHPGSQKNI
QLEAQLEEKTSLLALKSFVSHSCEVLGLWKILCEHQFHVIADMLDEELQNHLPEVTFREL
FLSGYQLCSLFISSLINSYLGDNASVDSISSKLREVCPNLYKNEDAACSKANEMLLAAKK
SVHVDEKEAKLKAALDLCKEIVPHIDLSQICQQFASNQFYVGILQICLVCAKKQDPKNAA
LHWYRNNEPPEDLEGFDAYVTRMNTYKHLTIVLDQLHNSSMTSTTTTNLTFNPNNSSFCQ
NESLPFKYSGAIAEAQSLIQLVLESDDELLHIAVYEWMISKELYGELISITNSSLESYLT
RTIERNPNQIHISDLLWKYYEKNLNHAAAAKILHKLAVGKGQGLSLSQRIGYLARAVMCM
RSDKVGSAPHLGVFLQELEDKREVAFIQQMVYDAISDLQTASPEIIEEAKNRLNNELFTC
TELYEDFAEPFKLWECNLALVHSTSHNDPHLIEDIWKNIIESELCKYGGESMDQKFSALL
IKIKSLTEQYIQSPRCFPLQFIVRTLEVIRCKHSPYDNQIYPVLISAGVSYSKLLQVYLM
INNTSDRTWSLEGNEFHITRTIAELCSYFADTPYIVLPVERRAAVTKSRDVISNCLLSLY
AKSQTQELIDILKGVESKLKRMEGLSL
Download sequence
Identical sequences E0VPL1
XP_002428055.1.24195 121224.XP_002428055 vb|PHUM361380-PA|EEB15317.1|nuclear

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]